Strain Fitness in Marinobacter adhaerens HP15 around HP15_3431

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
3,606,948	-		HP15_3430	0.57	+1.6
3,607,044	+		HP15_3430	0.63	+1.5
3,607,065	+		HP15_3430	0.64	+1.9
3,607,176	-		HP15_3430	0.70	+2.6
3,607,314	-		HP15_3430	0.78	+2.5
3,607,325	+		HP15_3430	0.78	+0.8
3,607,406	+		HP15_3430	0.83	+0.9
3,607,424	-		HP15_3430	0.84	+4.7
3,607,451	+		HP15_3430	0.85	+2.9
3,607,566	+				+1.9
3,607,574	-				+4.5
3,607,599	+				+2.5
3,607,740	-				+0.8
3,607,742	+				+0.2
3,607,870	-				+2.3
3,608,063	-				-0.8
3,608,075	+				+0.3
3,608,115	-				+1.6
3,608,201	-		HP15_3431	0.14	-0.9
3,608,214	-		HP15_3431	0.15	-1.6
3,608,286	+		HP15_3431	0.19	-0.7
3,608,350	+		HP15_3431	0.22	+0.8
3,608,358	-		HP15_3431	0.23	-1.0
3,608,368	+		HP15_3431	0.23	-1.7
3,608,400	+		HP15_3431	0.25	-0.7
3,608,407	+		HP15_3431	0.25	+1.0
3,608,407	+		HP15_3431	0.25	-1.8
3,608,407	+		HP15_3431	0.25	-0.2
3,608,415	-		HP15_3431	0.26	+0.6
3,608,415	-		HP15_3431	0.26	+1.9
3,608,415	-		HP15_3431	0.26	+1.5
3,608,415	-		HP15_3431	0.26	-1.4
3,608,510	+		HP15_3431	0.31	+1.3
3,608,559	-		HP15_3431	0.34	-1.2
3,608,608	-		HP15_3431	0.37	-1.6
3,608,629	+		HP15_3431	0.38	-0.8
3,608,672	+		HP15_3431	0.40	+2.9
3,608,681	-		HP15_3431	0.41	-2.8
3,608,701	-		HP15_3431	0.42	+1.3
3,608,794	-		HP15_3431	0.47	+0.9
3,608,848	+		HP15_3431	0.50	+0.2
3,608,856	-		HP15_3431	0.50	-0.2
3,608,856	-		HP15_3431	0.50	-3.3
3,608,876	+		HP15_3431	0.51	+0.0
3,609,049	-		HP15_3431	0.61	+1.0
3,609,200	+		HP15_3431	0.69	+0.7
3,609,298	+		HP15_3431	0.74	+2.5
3,609,400	-		HP15_3431	0.80	-1.3
3,609,419	-		HP15_3431	0.81	-2.1
3,609,438	-		HP15_3431	0.82	+1.3
3,609,477	+		HP15_3431	0.84	-0.4
3,609,547	-		HP15_3431	0.88	+0.2
3,609,566	-		HP15_3431	0.89	-1.3
3,609,604	+				+1.2
3,609,620	+				-0.5
3,609,645	-				-1.2
3,609,919	+		HP15_3432	0.21	+0.3
3,610,127	+		HP15_3432	0.59	+2.7
3,610,135	-		HP15_3432	0.61	-0.8
3,610,262	-		HP15_3432	0.84	-1.0
3,610,311	-				-0.0
3,610,349	-				+2.5
3,610,375	+				+0.2
3,610,429	-				-0.4
3,610,431	+				-0.5
3,610,473	+				-0.6
3,610,526	+				+2.2
3,610,539	-				-0.1
3,610,640	+				+1.5
3,610,693	+				+0.9