Strain Fitness in Marinobacter adhaerens HP15 around HP15_3213

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
3,362,272	+		HP15_3211	0.40	+0.5
3,362,280	-		HP15_3211	0.41	+2.0
3,362,297	-		HP15_3211	0.44	-1.9
3,362,297	-		HP15_3211	0.44	-2.4
3,362,487	+		HP15_3211	0.71	-4.0
3,362,630	+				-4.2
3,362,683	+		HP15_3212	0.12	+0.1
3,362,732	-		HP15_3212	0.42	+3.8
3,362,815	-				-2.4
3,362,828	+				+1.0
3,363,002	-				-0.5
3,363,100	-				+1.3
3,363,121	+				-1.7
3,363,129	-				+0.8
3,363,129	-				+0.1
3,363,218	-				-1.4
3,363,218	-				+0.7
3,363,226	-				-0.4
3,363,255	+				-2.9
3,363,263	-		HP15_3213	0.10	+0.0
3,363,288	+		HP15_3213	0.12	-3.6
3,363,296	-		HP15_3213	0.12	-4.5
3,363,735	-		HP15_3213	0.41	-0.1
3,363,800	-		HP15_3213	0.45	-6.3
3,363,961	+		HP15_3213	0.56	-2.8
3,364,069	+		HP15_3213	0.63	+0.2
3,364,117	-		HP15_3213	0.66	-3.2
3,364,218	-		HP15_3213	0.72	-1.4
3,364,308	+		HP15_3213	0.78	-1.0
3,364,316	-		HP15_3213	0.79	+0.0
3,364,336	+		HP15_3213	0.80	-0.6
3,364,393	+		HP15_3213	0.84	-6.5
3,364,436	-		HP15_3213	0.86	-3.4
3,364,436	-		HP15_3213	0.86	-2.1
3,364,461	-		HP15_3213	0.88	-3.1
3,364,549	+				-4.0
3,364,572	+				-2.0
3,364,572	+				-0.8
3,364,672	+				-3.8
3,364,747	-				-0.8
3,365,612	+				-0.2
3,365,616	-				+0.4