Strain Fitness in Marinobacter adhaerens HP15 around HP15_2852

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
2,990,401	-		HP15_2851	0.38	+1.2
2,990,403	-		HP15_2851	0.39	+1.6
2,990,426	-		HP15_2851	0.41	-1.2
2,990,473	+		HP15_2851	0.45	+1.2
2,990,481	-		HP15_2851	0.45	+0.9
2,990,482	+		HP15_2851	0.45	+0.1
2,990,540	-		HP15_2851	0.51	-1.1
2,990,621	+		HP15_2851	0.58	-0.9
2,990,654	+		HP15_2851	0.61	+2.0
2,990,716	+		HP15_2851	0.66	+0.7
2,990,724	-		HP15_2851	0.67	+0.8
2,990,729	-		HP15_2851	0.67	+1.0
2,990,757	+		HP15_2851	0.70	-2.5
2,990,786	-		HP15_2851	0.72	-0.6
2,990,850	+		HP15_2851	0.78	-0.1
2,990,862	-		HP15_2851	0.79	+1.2
2,990,910	+		HP15_2851	0.83	-0.7
2,990,910	+		HP15_2851	0.83	-0.9
2,990,910	-		HP15_2851	0.83	+0.9
2,990,918	-		HP15_2851	0.84	-2.0
2,990,918	-		HP15_2851	0.84	-2.4
2,990,920	-		HP15_2851	0.84	-1.6
2,990,938	+		HP15_2851	0.85	-2.0
2,990,963	+		HP15_2851	0.88	+1.3
2,990,963	+		HP15_2851	0.88	+1.4
2,990,971	-		HP15_2851	0.88	-1.1
2,990,971	-		HP15_2851	0.88	+2.1
2,991,052	+				-1.7
2,991,055	-				+2.2
2,991,145	-				+2.2
2,991,288	-				+2.2
2,991,316	+				-0.6
2,991,316	+				-1.4
2,991,444	+				+1.2
2,991,492	+				+0.5
2,991,579	+				-0.6
2,991,605	-				+3.5
2,991,648	-		HP15_2852	0.11	-0.6
2,991,694	-		HP15_2852	0.13	-0.5
2,991,792	+		HP15_2852	0.18	-0.5
2,991,792	+		HP15_2852	0.18	-0.0
2,991,800	-		HP15_2852	0.18	-0.6
2,991,800	-		HP15_2852	0.18	+1.8
2,991,800	-		HP15_2852	0.18	-0.7
2,991,800	-		HP15_2852	0.18	+0.4
2,991,800	-		HP15_2852	0.18	-0.9
2,991,800	-		HP15_2852	0.18	+0.6
2,991,800	-		HP15_2852	0.18	+2.2
2,991,802	-		HP15_2852	0.18	+0.2
2,991,837	+		HP15_2852	0.20	-1.3
2,991,885	+		HP15_2852	0.22	+1.1
2,991,957	+		HP15_2852	0.25	-0.7
2,991,972	-		HP15_2852	0.26	+0.2
2,992,024	-		HP15_2852	0.28	+3.0
2,992,066	-		HP15_2852	0.30	-0.5
2,992,147	-		HP15_2852	0.33	-2.9
2,992,162	-		HP15_2852	0.34	-0.7
2,992,310	+		HP15_2852	0.41	+1.5
2,992,320	+		HP15_2852	0.41	-0.6
2,992,389	-		HP15_2852	0.44	+1.4
2,992,439	+		HP15_2852	0.46	+0.8
2,992,446	+		HP15_2852	0.47	-1.1
2,992,454	+		HP15_2852	0.47	-0.3
2,992,454	+		HP15_2852	0.47	-1.7
2,992,462	-		HP15_2852	0.47	+1.2
2,992,534	+		HP15_2852	0.50	+2.0
2,992,591	+		HP15_2852	0.53	-1.0
2,992,618	-		HP15_2852	0.54	-1.5
2,992,691	-		HP15_2852	0.57	+0.2
2,992,863	+		HP15_2852	0.65	-1.0
2,992,927	+		HP15_2852	0.68	-0.6
2,992,935	-		HP15_2852	0.68	+2.4
2,992,979	+		HP15_2852	0.70	-1.0
2,993,026	+		HP15_2852	0.72	-0.1
2,993,114	+		HP15_2852	0.76	-0.5
2,993,160	-		HP15_2852	0.78	-1.3
2,993,226	+		HP15_2852	0.81	-2.5
2,993,320	-		HP15_2852	0.85	-0.7
2,993,321	-		HP15_2852	0.85	-3.5
2,993,332	+		HP15_2852	0.85	+1.5
2,993,382	+		HP15_2852	0.88	-1.6
2,993,385	-		HP15_2852	0.88	-0.3
2,993,393	+		HP15_2852	0.88	+2.6
2,993,438	+				-1.5
2,993,438	+				-1.4
2,993,438	+				+0.4
2,993,446	-				-0.4
2,993,446	-				-0.2
2,993,456	-				-0.2
2,993,472	-				+0.5
2,993,472	-				+0.8
2,993,494	+				-1.1
2,993,540	+				+0.3
2,993,597	-				-1.7
2,993,645	-				-0.3
2,993,678	-				-0.3
2,993,744	+				-0.4
2,993,744	+				-0.4
2,993,752	-				+2.4
2,993,752	-				+0.4
2,993,752	-				+0.1
2,993,868	-		HP15_2853	0.13	-0.1
2,993,989	+		HP15_2853	0.21	+1.2
2,994,096	-		HP15_2853	0.29	-0.4
2,994,182	-		HP15_2853	0.35	-0.4
2,994,199	-		HP15_2853	0.36	-0.3
2,994,258	-		HP15_2853	0.40	-0.8
2,994,298	+		HP15_2853	0.43	+0.4
2,994,430	+		HP15_2853	0.52	+0.5
2,994,438	-		HP15_2853	0.53	+0.3
2,994,633	-		HP15_2853	0.66	-0.5