Strain Fitness in Marinobacter adhaerens HP15 around HP15_2207
Experiment: monoculture; Experiment B, time point 7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 7 |
---|---|---|---|---|---|
remove | |||||
2,325,613 | - | -1.2 | |||
2,325,781 | - | -1.0 | |||
2,325,781 | - | +0.5 | |||
2,325,864 | + | HP15_2206 | 0.19 | -2.6 | |
2,325,871 | - | HP15_2206 | 0.20 | -2.3 | |
2,325,873 | - | HP15_2206 | 0.21 | -1.9 | |
2,325,897 | + | HP15_2206 | 0.24 | +2.6 | |
2,325,904 | - | HP15_2206 | 0.25 | -1.7 | |
2,326,020 | + | HP15_2206 | 0.39 | +1.7 | |
2,326,028 | - | HP15_2206 | 0.41 | -0.4 | |
2,326,041 | + | HP15_2206 | 0.42 | +0.2 | |
2,326,041 | + | HP15_2206 | 0.42 | +1.7 | |
2,326,041 | + | HP15_2206 | 0.42 | +0.3 | |
2,326,049 | - | HP15_2206 | 0.43 | -0.7 | |
2,326,082 | + | HP15_2206 | 0.47 | -0.8 | |
2,326,096 | + | HP15_2206 | 0.49 | +2.0 | |
2,326,127 | - | HP15_2206 | 0.53 | +1.3 | |
2,326,245 | + | HP15_2206 | 0.68 | +1.6 | |
2,326,283 | - | HP15_2206 | 0.73 | +1.8 | |
2,326,353 | + | HP15_2206 | 0.82 | +1.9 | |
2,326,372 | + | HP15_2206 | 0.85 | +0.8 | |
2,326,393 | + | HP15_2206 | 0.87 | -0.9 | |
2,326,465 | - | -0.1 | |||
2,327,395 | - | HP15_2208 | 0.17 | +0.0 |
Or see this region's nucleotide sequence