Strain Fitness in Marinobacter adhaerens HP15 around HP15_2205

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
2,323,027	+				-0.8
2,323,087	-				-1.1
2,323,094	-				+0.9
2,323,174	-		HP15_2204	0.18	+1.0
2,323,536	+		HP15_2204	0.66	-0.5
2,323,613	-		HP15_2204	0.77	+1.4
2,323,613	-		HP15_2204	0.77	+1.1
2,323,791	+				-0.5
2,323,879	+				-0.9
2,324,019	+				-2.4
2,324,027	-				+1.7
2,324,044	+				+0.3
2,324,397	-		HP15_2205	0.33	+2.3
2,324,621	+		HP15_2205	0.49	-2.7
2,324,636	+		HP15_2205	0.50	+0.2
2,324,636	+		HP15_2205	0.50	+1.2
2,324,644	-		HP15_2205	0.50	+0.6
2,324,706	-		HP15_2205	0.54	+0.1
2,324,750	-		HP15_2205	0.58	+2.3
2,324,751	-		HP15_2205	0.58	-0.8
2,324,935	-		HP15_2205	0.70	+1.0
2,324,980	+		HP15_2205	0.73	-1.4
2,325,045	+		HP15_2205	0.78	+0.5
2,325,168	+		HP15_2205	0.86	+1.8
2,325,176	-		HP15_2205	0.87	+0.6
2,325,220	-				+0.8
2,325,305	+				-0.9
2,325,312	+				-0.5
2,325,313	-				-1.3
2,325,405	+				-0.5
2,325,454	+				+2.1
2,325,454	+				-0.9
2,325,459	+				-5.0
2,325,613	-				-1.2
2,325,781	-				-1.0
2,325,781	-				+0.5
2,325,864	+		HP15_2206	0.19	-2.6
2,325,871	-		HP15_2206	0.20	-2.3
2,325,873	-		HP15_2206	0.21	-1.9
2,325,897	+		HP15_2206	0.24	+2.6
2,325,904	-		HP15_2206	0.25	-1.7
2,326,020	+		HP15_2206	0.39	+1.7
2,326,028	-		HP15_2206	0.41	-0.4
2,326,041	+		HP15_2206	0.42	+0.2
2,326,041	+		HP15_2206	0.42	+1.7
2,326,041	+		HP15_2206	0.42	+0.3
2,326,049	-		HP15_2206	0.43	-0.7
2,326,082	+		HP15_2206	0.47	-0.8
2,326,096	+		HP15_2206	0.49	+2.0
2,326,127	-		HP15_2206	0.53	+1.3
2,326,245	+		HP15_2206	0.68	+1.6
2,326,283	-		HP15_2206	0.73	+1.8
2,326,353	+		HP15_2206	0.82	+1.9