Strain Fitness in Marinobacter adhaerens HP15 around HP15_1891

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
1,995,697	-		HP15_1890	0.62	+0.3
1,995,699	+		HP15_1890	0.62	-0.6
1,995,699	+		HP15_1890	0.62	+1.5
1,995,699	+		HP15_1890	0.62	-0.8
1,995,835	+		HP15_1890	0.69	+2.8
1,995,906	-		HP15_1890	0.72	-2.4
1,995,911	-		HP15_1890	0.72	-0.4
1,995,971	-		HP15_1890	0.75	-0.1
1,996,120	+		HP15_1890	0.82	+0.1
1,996,120	+		HP15_1890	0.82	+0.2
1,996,128	-		HP15_1890	0.83	-0.9
1,996,152	-		HP15_1890	0.84	+0.3
1,996,157	-		HP15_1890	0.84	-1.8
1,996,203	-		HP15_1890	0.86	+0.1
1,996,210	+		HP15_1890	0.86	+1.9
1,996,213	-		HP15_1890	0.87	+1.6
1,996,218	-		HP15_1890	0.87	-0.1
1,996,390	-				+1.0
1,996,478	+				-0.3
1,996,478	+				+0.7
1,996,486	-				+1.8
1,996,598	+				-0.4
1,996,606	-				+2.3
1,996,728	-				+2.0
1,996,735	+				+0.8
1,996,762	-				-0.6
1,996,775	-				-0.3
1,996,782	-				+2.2
1,996,873	-		HP15_1891	0.17	+1.9
1,996,902	+		HP15_1891	0.19	-2.0
1,996,936	+		HP15_1891	0.21	-0.8
1,996,945	-		HP15_1891	0.22	-1.9
1,996,949	+		HP15_1891	0.22	+1.4
1,997,119	-		HP15_1891	0.35	+0.3
1,997,226	-		HP15_1891	0.43	-1.1
1,997,416	+		HP15_1891	0.58	+1.8
1,997,436	+		HP15_1891	0.59	+2.4
1,997,504	+		HP15_1891	0.64	+2.7
1,997,546	+		HP15_1891	0.68	+1.7
1,997,554	-		HP15_1891	0.68	+1.3
1,997,612	+		HP15_1891	0.73	+1.1
1,997,620	-		HP15_1891	0.73	+0.5
1,997,627	+		HP15_1891	0.74	+0.4
1,997,786	+		HP15_1891	0.86	+0.7
1,997,803	-		HP15_1891	0.87	+1.1
1,997,860	-				+1.0
1,997,860	-				+2.4
1,997,860	-				+1.9
1,997,860	-				+1.5
1,997,923	-				-1.5
1,997,968	+				-1.0
1,997,991	+				-0.5
1,997,999	-				+1.5
1,997,999	-				-1.6
1,997,999	-				-0.1
1,998,074	-				-0.9
1,998,087	-				+0.1
1,998,167	+				-1.1
1,998,175	-				+0.6
1,998,177	+				+1.7
1,998,177	+				-1.1
1,998,185	-				-0.2
1,998,252	+				+0.6
1,998,316	-		HP15_1892	0.12	-1.0
1,998,355	+		HP15_1892	0.13	+1.2
1,998,365	+		HP15_1892	0.14	+1.2
1,998,373	-		HP15_1892	0.14	+2.4
1,998,373	-		HP15_1892	0.14	-0.9
1,998,373	-		HP15_1892	0.14	+1.4
1,998,373	-		HP15_1892	0.14	-1.2
1,998,373	-		HP15_1892	0.14	-0.8
1,998,381	+		HP15_1892	0.14	+2.8
1,998,422	+		HP15_1892	0.16	-0.6
1,998,459	+		HP15_1892	0.17	-0.6
1,998,459	+		HP15_1892	0.17	+1.9
1,998,459	+		HP15_1892	0.17	-0.2
1,998,520	+		HP15_1892	0.20	+0.6
1,998,582	+		HP15_1892	0.22	-1.0
1,998,622	-		HP15_1892	0.23	+2.0
1,998,646	+		HP15_1892	0.24	+1.1
1,998,694	+		HP15_1892	0.26	-1.4
1,998,873	-		HP15_1892	0.33	+1.6