Strain Fitness in Marinobacter adhaerens HP15 around HP15_1110

Experiment: monoculture; Experiment B, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 7
1,136,106	+		HP15_1108	0.62	-0.3
1,136,255	+		HP15_1108	0.81	-0.1
1,136,275	-		HP15_1108	0.84	-0.2
1,136,280	-		HP15_1108	0.85	-1.1
1,136,313	+		HP15_1108	0.89	+2.0
1,136,336	+				-1.8
1,136,336	+				+1.6
1,136,532	+				-1.0
1,136,540	-				+1.8
1,136,540	-				+0.1
1,136,540	-				-0.3
1,136,566	-				+0.0
1,136,585	-				-0.3
1,136,671	+				-0.0
1,136,755	+				-2.0
1,136,776	-				+0.5
1,136,785	-				-1.3
1,136,793	-		HP15_1109	0.11	-1.7
1,136,885	+		HP15_1109	0.47	+1.8
1,136,920	-		HP15_1109	0.61	+0.3
1,136,920	-		HP15_1109	0.61	+1.2
1,137,027	+				+2.0
1,137,087	-				+0.3
1,137,096	+				-3.2
1,137,096	-				+0.6
1,137,101	-				-0.4
1,137,125	-				+1.5
1,137,141	+				-0.8
1,137,144	-				-0.5
1,137,144	-				+2.3
1,137,144	-				-1.2
1,137,149	-				+1.4
1,137,149	-				+0.9
1,137,160	-				-1.8
1,137,185	+		HP15_1110	0.12	+0.4
1,137,304	-		HP15_1110	0.26	+0.3
1,137,321	+		HP15_1110	0.28	-0.5
1,137,396	+		HP15_1110	0.37	-0.2
1,137,412	+		HP15_1110	0.38	+0.8
1,137,417	+		HP15_1110	0.39	+0.3
1,137,422	+		HP15_1110	0.40	-0.1
1,137,425	-		HP15_1110	0.40	+0.8
1,137,550	-		HP15_1110	0.54	+1.6
1,137,612	-		HP15_1110	0.61	-1.0
1,137,670	+		HP15_1110	0.68	-0.1
1,137,707	+		HP15_1110	0.72	+1.6
1,137,714	+		HP15_1110	0.73	+1.6
1,137,764	+		HP15_1110	0.79	+1.6
1,137,772	-		HP15_1110	0.80	-0.2
1,137,822	+		HP15_1110	0.85	+0.4
1,137,897	+				-1.0
1,138,017	-				-0.7
1,138,038	-				-1.3
1,138,048	-				+1.2
1,138,122	-		HP15_1111	0.11	-0.7
1,138,157	-		HP15_1111	0.13	-0.4
1,138,262	+		HP15_1111	0.20	-1.8
1,138,262	+		HP15_1111	0.20	-0.2
1,138,386	+		HP15_1111	0.29	+0.6
1,138,417	-		HP15_1111	0.31	+1.6
1,138,493	+		HP15_1111	0.36	-0.5
1,138,508	+		HP15_1111	0.37	+0.4
1,138,516	-		HP15_1111	0.38	+1.2
1,138,625	-		HP15_1111	0.45	+0.6
1,138,629	+		HP15_1111	0.45	+0.0
1,138,667	-		HP15_1111	0.48	+0.3
1,138,718	+		HP15_1111	0.51	-0.1
1,138,767	+		HP15_1111	0.54	-1.8
1,138,846	-		HP15_1111	0.60	-1.2
1,138,857	-		HP15_1111	0.61	-2.2
1,138,889	+		HP15_1111	0.63	+1.6