Strain Fitness in Marinobacter adhaerens HP15 around HP15_754

Experiment: monoculture; Experiment B, time point 5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_753 and HP15_754 are separated by 195 nucleotidesHP15_754 and HP15_755 are separated by 157 nucleotides HP15_753: HP15_753 - protein containing DUF1631, at 761,957 to 764,188 _753 HP15_754: HP15_754 - membrane protein containing DUF1282, at 764,384 to 764,986 _754 HP15_755: HP15_755 - Mg2+ and Co2+ transporter CorB, at 765,144 to 766,430 _755 Position (kb) 764 765Strain fitness (log2 ratio) -2 -1 0 1 2at 763.501 kb on + strand, within HP15_753at 763.724 kb on - strand, within HP15_753at 763.778 kb on - strand, within HP15_753at 763.793 kb on + strand, within HP15_753at 763.818 kb on - strand, within HP15_753at 763.834 kb on + strand, within HP15_753at 763.834 kb on + strand, within HP15_753at 763.842 kb on - strand, within HP15_753at 764.332 kb on + strandat 764.332 kb on + strandat 764.346 kb on + strandat 764.459 kb on - strand, within HP15_754at 764.543 kb on - strand, within HP15_754at 764.857 kb on + strand, within HP15_754at 764.900 kb on - strand, within HP15_754at 764.908 kb on - strand, within HP15_754at 764.962 kb on + strandat 764.970 kb on - strandat 765.024 kb on + strandat 765.051 kb on + strandat 765.238 kb on - strandat 765.405 kb on - strand, within HP15_755at 765.567 kb on + strand, within HP15_755at 765.661 kb on - strand, within HP15_755at 765.682 kb on + strand, within HP15_755at 765.756 kb on + strand, within HP15_755

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Per-strain Table

Position Strand Gene LocusTag Fraction monoculture; Experiment B, time point 5
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763,501 + HP15_753 0.69 -0.6
763,724 - HP15_753 0.79 -0.6
763,778 - HP15_753 0.82 -0.7
763,793 + HP15_753 0.82 -0.2
763,818 - HP15_753 0.83 -0.1
763,834 + HP15_753 0.84 +1.0
763,834 + HP15_753 0.84 -0.8
763,842 - HP15_753 0.84 +1.1
764,332 + -0.8
764,332 + +1.6
764,346 + +2.2
764,459 - HP15_754 0.12 -0.5
764,543 - HP15_754 0.26 -1.0
764,857 + HP15_754 0.78 -0.6
764,900 - HP15_754 0.86 +1.8
764,908 - HP15_754 0.87 +0.8
764,962 + +1.9
764,970 - +0.1
765,024 + +2.5
765,051 + +1.4
765,238 - -2.4
765,405 - HP15_755 0.20 -0.8
765,567 + HP15_755 0.33 -1.4
765,661 - HP15_755 0.40 +0.8
765,682 + HP15_755 0.42 +2.4
765,756 + HP15_755 0.48 +0.2

Or see this region's nucleotide sequence