Experiment: monoculture; Experiment B, time point 5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_685 and HP15_686 are separated by 35 nucleotides HP15_686 and HP15_687 are separated by 23 nucleotides
HP15_685: HP15_685 - phage repressor, at 701,983 to 702,966
_685
HP15_686: HP15_686 - conserved hypothetical protein, at 703,002 to 703,913
_686
HP15_687: HP15_687 - protein containing domain of unknown function DUF1994, at 703,937 to 704,788
_687
Position (kb) 703
704 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 702.986 kb on + strand at 703.046 kb on - strand at 703.046 kb on - strand at 703.107 kb on + strand, within HP15_686 at 703.147 kb on - strand, within HP15_686 at 703.147 kb on - strand, within HP15_686 at 703.279 kb on - strand, within HP15_686 at 703.286 kb on + strand, within HP15_686 at 703.294 kb on - strand, within HP15_686 at 703.340 kb on - strand, within HP15_686 at 703.344 kb on + strand, within HP15_686 at 703.549 kb on + strand, within HP15_686 at 703.551 kb on - strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.743 kb on - strand, within HP15_686 at 704.053 kb on - strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.107 kb on + strand, within HP15_687 at 704.115 kb on - strand, within HP15_687 at 704.115 kb on - strand, within HP15_687 at 704.115 kb on - strand, within HP15_687 at 704.115 kb on - strand, within HP15_687 at 704.115 kb on - strand, within HP15_687 at 704.115 kb on - strand, within HP15_687 at 704.115 kb on - strand, within HP15_687 at 704.307 kb on + strand, within HP15_687 at 704.307 kb on + strand, within HP15_687 at 704.315 kb on - strand, within HP15_687 at 704.365 kb on + strand, within HP15_687 at 704.371 kb on - strand, within HP15_687 at 704.378 kb on + strand, within HP15_687 at 704.469 kb on + strand, within HP15_687 at 704.476 kb on - strand, within HP15_687 at 704.635 kb on - strand, within HP15_687 at 704.638 kb on + strand, within HP15_687 at 704.708 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction monoculture; Experiment B, time point 5 remove 702,986 + +1.8 703,046 - -0.7 703,046 - -2.6 703,107 + HP15_686 0.12 -0.5 703,147 - HP15_686 0.16 +1.9 703,147 - HP15_686 0.16 +1.2 703,279 - HP15_686 0.30 -3.0 703,286 + HP15_686 0.31 +1.1 703,294 - HP15_686 0.32 +3.5 703,340 - HP15_686 0.37 +0.4 703,344 + HP15_686 0.38 +2.6 703,549 + HP15_686 0.60 +0.0 703,551 - HP15_686 0.60 +0.0 703,735 + HP15_686 0.80 +2.7 703,735 + HP15_686 0.80 +2.0 703,735 + HP15_686 0.80 -0.1 703,735 + HP15_686 0.80 +2.5 703,743 - HP15_686 0.81 +1.9 704,053 - HP15_687 0.14 +1.2 704,107 + HP15_687 0.20 -0.4 704,107 + HP15_687 0.20 +1.4 704,107 + HP15_687 0.20 -0.7 704,107 + HP15_687 0.20 -0.5 704,107 + HP15_687 0.20 -1.2 704,107 + HP15_687 0.20 -1.8 704,107 + HP15_687 0.20 -0.3 704,107 + HP15_687 0.20 +0.3 704,107 + HP15_687 0.20 -1.1 704,107 + HP15_687 0.20 -0.5 704,115 - HP15_687 0.21 -2.0 704,115 - HP15_687 0.21 +0.1 704,115 - HP15_687 0.21 -0.3 704,115 - HP15_687 0.21 +1.9 704,115 - HP15_687 0.21 -0.8 704,115 - HP15_687 0.21 -0.3 704,115 - HP15_687 0.21 +2.1 704,307 + HP15_687 0.43 -0.2 704,307 + HP15_687 0.43 -0.2 704,315 - HP15_687 0.44 +1.9 704,365 + HP15_687 0.50 -0.7 704,371 - HP15_687 0.51 +1.1 704,378 + HP15_687 0.52 +0.6 704,469 + HP15_687 0.62 -1.6 704,476 - HP15_687 0.63 -0.3 704,635 - HP15_687 0.82 +1.8 704,638 + HP15_687 0.82 -1.5 704,708 - -0.4
Or see this region's nucleotide sequence