Strain Fitness in Marinobacter adhaerens HP15 around HP15_70
Experiment: monoculture; Experiment B, time point 5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 5 |
---|---|---|---|---|---|
remove | |||||
77,331 | - | -0.8 | |||
77,353 | + | +0.7 | |||
77,378 | - | -0.5 | |||
77,379 | + | -0.3 | |||
77,478 | - | -1.1 | |||
77,565 | + | -2.0 | |||
77,594 | + | -0.6 | |||
77,607 | - | +1.0 | |||
77,639 | + | +0.8 | |||
77,667 | + | -0.5 | |||
77,782 | - | -0.5 | |||
77,839 | + | -0.6 | |||
77,892 | + | +1.3 | |||
77,957 | - | -1.1 | |||
78,061 | - | +1.8 | |||
78,071 | - | -0.8 | |||
78,071 | - | +2.1 | |||
78,071 | - | -1.2 | |||
78,077 | - | -1.2 | |||
78,082 | + | +0.4 | |||
78,110 | - | HP15_69 | 0.32 | +2.4 | |
78,164 | + | HP15_69 | 0.82 | -0.3 | |
78,330 | + | HP15_70 | 0.43 | +0.8 | |
78,330 | + | HP15_70 | 0.43 | +1.5 | |
78,357 | + | HP15_70 | 0.52 | -0.9 | |
78,359 | - | HP15_70 | 0.53 | -2.0 | |
78,365 | - | HP15_70 | 0.54 | +2.0 | |
78,377 | - | HP15_70 | 0.58 | -0.4 | |
78,398 | + | HP15_70 | 0.65 | -0.7 | |
78,585 | + | +2.3 | |||
78,593 | - | +1.8 | |||
78,610 | - | -3.3 | |||
78,625 | - | -0.0 | |||
78,640 | + | -0.1 | |||
78,648 | - | -0.9 | |||
78,680 | - | -1.2 | |||
78,699 | + | +1.2 | |||
78,710 | + | +0.2 | |||
78,732 | - | +2.8 | |||
78,797 | - | +2.0 | |||
78,902 | + | +0.7 | |||
78,940 | - | -0.9 | |||
78,958 | - | -0.5 | |||
79,020 | - | +1.6 | |||
79,032 | + | -0.2 | |||
79,089 | + | +0.2 | |||
79,101 | + | -0.4 | |||
79,157 | + | -0.5 | |||
79,239 | + | +1.6 | |||
79,247 | - | -0.1 | |||
79,256 | - | +1.0 | |||
79,274 | + | -2.3 | |||
79,274 | + | -0.3 | |||
79,277 | - | -0.4 | |||
79,329 | - | -0.5 | |||
79,354 | - | -0.8 | |||
79,381 | + | -1.2 | |||
79,381 | + | -1.6 | |||
79,381 | + | +1.8 | |||
79,381 | + | +0.5 | |||
79,389 | - | -0.6 | |||
79,421 | - | -0.8 | |||
79,421 | - | +1.7 | |||
79,498 | + | +1.5 | |||
79,506 | - | -1.0 |
Or see this region's nucleotide sequence