Strain Fitness in Marinobacter adhaerens HP15 around HP15_59

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
63,201	+		HP15_57	0.79	+1.9
63,313	-				+1.9
63,343	-				-0.4
63,461	-				+1.6
63,479	+				-0.6
63,505	+		HP15_58	0.10	+0.0
63,569	-		HP15_58	0.21	+1.9
63,585	+		HP15_58	0.23	+0.5
63,593	-		HP15_58	0.24	-0.8
63,595	+		HP15_58	0.25	+1.9
63,601	-		HP15_58	0.26	-0.4
63,775	+		HP15_58	0.53	-2.3
63,854	-		HP15_58	0.66	+0.2
63,870	-		HP15_58	0.68	+0.9
63,870	-		HP15_58	0.68	-0.2
63,870	-		HP15_58	0.68	-0.5
63,896	+		HP15_58	0.73	-0.8
63,896	+		HP15_58	0.73	+0.5
63,904	-		HP15_58	0.74	+1.2
63,914	+		HP15_58	0.75	-1.4
63,914	-		HP15_58	0.75	+1.5
63,933	+		HP15_58	0.78	+0.5
63,936	-		HP15_58	0.79	+0.3
63,985	+		HP15_58	0.87	+0.0
63,992	+		HP15_58	0.88	-0.5
63,993	-		HP15_58	0.88	-0.7
63,997	+		HP15_58	0.89	-0.8
64,000	-		HP15_58	0.89	-0.3
64,000	-		HP15_58	0.89	-0.5
64,005	-		HP15_58	0.90	-1.5
64,031	-				-1.5
64,063	+				-0.2
64,066	-				+0.1
64,066	-				+1.7
64,067	+				-0.5
64,071	-				-0.5
64,139	+				+0.0
64,141	+				-0.1
64,141	+				-0.1
64,142	-				-0.5
64,149	-				-0.7
64,196	+				+0.2
64,229	-				-0.8
64,229	-				-0.7
64,274	+		HP15_59	0.15	+1.7
64,282	-		HP15_59	0.16	+2.0
64,282	-		HP15_59	0.16	-1.8
64,282	-		HP15_59	0.16	+0.7
64,307	+		HP15_59	0.20	+2.2
64,310	-		HP15_59	0.20	+1.3
64,351	-		HP15_59	0.26	-1.1
64,426	+		HP15_59	0.36	-0.9
64,463	-		HP15_59	0.41	+0.4
64,517	+		HP15_59	0.48	-1.3
64,525	-		HP15_59	0.49	-2.5
64,548	+		HP15_59	0.52	-1.1
64,548	+		HP15_59	0.52	-0.3
64,548	+		HP15_59	0.52	-1.0
64,548	+		HP15_59	0.52	+2.0
64,564	-		HP15_59	0.54	-1.7
64,584	-		HP15_59	0.57	-0.6
64,623	-		HP15_59	0.62	+2.0
64,627	-		HP15_59	0.63	-0.3
64,692	+		HP15_59	0.71	-1.8
64,692	+		HP15_59	0.71	+0.7
64,692	+		HP15_59	0.71	-0.0
64,700	-		HP15_59	0.72	-0.3
64,700	-		HP15_59	0.72	+1.2
64,700	-		HP15_59	0.72	-0.8
64,700	-		HP15_59	0.72	+0.0
64,700	-		HP15_59	0.72	-0.9
64,795	+		HP15_59	0.85	+2.4
64,803	-		HP15_59	0.86	+0.1
64,839	-				-0.6
64,847	-				-0.2
64,849	+				-0.8
64,880	+				-0.4
64,900	+				+0.5
64,908	-				+0.2
64,908	-				-0.4
64,908	-				+0.3
64,986	-		HP15_60	0.11	+2.1
65,030	+		HP15_60	0.19	-0.3
65,036	-		HP15_60	0.20	+2.5
65,088	+		HP15_60	0.29	-1.5
65,118	-		HP15_60	0.34	-1.7
65,278	+		HP15_60	0.61	-1.2
65,286	-		HP15_60	0.62	+1.5
65,288	+		HP15_60	0.63	+1.4
65,320	+		HP15_60	0.68	+1.0
65,320	+		HP15_60	0.68	-1.0
65,329	-		HP15_60	0.70	-0.4
65,329	-		HP15_60	0.70	-0.1
65,339	-		HP15_60	0.71	+1.7
65,561	+				+1.9
65,647	-				+1.6
65,687	-		HP15_61	0.13	-0.2
65,760	+		HP15_61	0.19	+1.3
65,767	+		HP15_61	0.19	-0.3
65,876	-		HP15_61	0.28	+2.2
65,896	-		HP15_61	0.30	-2.6
65,898	+		HP15_61	0.30	+1.0
65,906	-		HP15_61	0.31	-0.4
65,906	-		HP15_61	0.31	+0.1
65,906	-		HP15_61	0.31	-1.3