Strain Fitness in Marinobacter adhaerens HP15 around HP15_532
Experiment: monoculture; Experiment B, time point 5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 5 |
---|---|---|---|---|---|
remove | |||||
548,890 | + | HP15_531 | 0.41 | -5.1 | |
548,900 | + | HP15_531 | 0.42 | -1.5 | |
549,000 | - | HP15_531 | 0.48 | +1.6 | |
549,016 | - | HP15_531 | 0.49 | -0.6 | |
549,158 | + | HP15_531 | 0.57 | -2.4 | |
549,181 | - | HP15_531 | 0.58 | -2.9 | |
549,472 | + | HP15_531 | 0.75 | -4.2 | |
549,509 | - | HP15_531 | 0.77 | -2.9 | |
549,611 | + | HP15_531 | 0.83 | -6.9 | |
549,662 | + | HP15_531 | 0.86 | -1.2 | |
549,827 | + | -2.3 | |||
549,881 | + | -0.2 | |||
550,256 | - | HP15_532 | 0.74 | -0.9 | |
550,256 | - | HP15_532 | 0.74 | +1.6 | |
550,267 | + | HP15_532 | 0.76 | -5.0 | |
550,296 | + | HP15_532 | 0.82 | -2.8 | |
550,296 | + | HP15_532 | 0.82 | -2.6 | |
550,296 | + | HP15_532 | 0.82 | -2.7 | |
550,383 | + | +0.3 | |||
550,393 | + | -0.5 | |||
550,404 | + | -0.9 |
Or see this region's nucleotide sequence