Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g50

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
42,141	-				-0.4
42,195	-				-1.1
42,276	-				-1.2
42,301	-				+0.1
42,323	+				+2.1
42,357	-				-0.0
42,365	-				-2.0
42,372	+				+2.2
42,385	-				+0.9
42,390	-				+2.7
42,401	-				+1.0
42,419	+				-1.4
42,425	+		HP15_p187g48	0.11	-0.7
42,429	+		HP15_p187g48	0.12	-1.2
42,469	+		HP15_p187g48	0.24	-3.3
42,469	+		HP15_p187g48	0.24	-0.1
42,477	-		HP15_p187g48	0.27	+1.6
42,477	-		HP15_p187g48	0.27	+1.6
42,477	-		HP15_p187g48	0.27	-1.7
42,477	-		HP15_p187g48	0.27	+0.3
42,530	-		HP15_p187g48	0.43	-0.9
42,546	-		HP15_p187g48	0.48	+1.6
42,571	+		HP15_p187g48	0.56	+1.2
42,579	-		HP15_p187g48	0.59	-0.4
42,608	+		HP15_p187g48	0.68	-1.0
42,608	+		HP15_p187g48	0.68	+2.0
42,701	+				-0.8
42,709	-				+3.5
42,709	-				-1.7
42,776	+				+2.6
42,784	-				+1.8
42,827	-		HP15_p187g49	0.18	-0.7
42,876	-		HP15_p187g49	0.31	+1.6
42,896	+		HP15_p187g49	0.36	-1.6
42,936	-		HP15_p187g49	0.47	-0.9
42,988	+		HP15_p187g49	0.61	-0.8
43,004	+		HP15_p187g49	0.65	+2.0
43,053	+		HP15_p187g49	0.78	-0.7
43,053	+		HP15_p187g49	0.78	-1.7
43,061	-		HP15_p187g49	0.80	-1.4
43,071	+		HP15_p187g49	0.83	+1.4
43,117	-				+3.0
43,142	+				+1.6
43,142	+				+1.7
43,150	-				+1.7
43,173	+				-1.0
43,196	+				-1.1
43,204	-				-0.6
43,386	-		HP15_p187g50	0.28	-1.2
43,393	+		HP15_p187g50	0.29	+1.2
43,396	-		HP15_p187g50	0.29	-1.6
43,401	-		HP15_p187g50	0.30	-1.4
43,401	-		HP15_p187g50	0.30	+1.0
43,436	+		HP15_p187g50	0.34	+1.9
43,436	+		HP15_p187g50	0.34	-1.7
43,436	+		HP15_p187g50	0.34	-1.5
43,442	+		HP15_p187g50	0.35	+1.3
43,442	+		HP15_p187g50	0.35	-1.3
43,444	-		HP15_p187g50	0.35	-0.7
43,450	-		HP15_p187g50	0.36	-2.1
43,450	-		HP15_p187g50	0.36	-2.0
43,461	+		HP15_p187g50	0.37	-1.4
43,472	+		HP15_p187g50	0.38	+1.9
43,480	-		HP15_p187g50	0.39	-0.4
43,543	-		HP15_p187g50	0.46	-0.7
43,568	-		HP15_p187g50	0.49	+2.0
43,601	+		HP15_p187g50	0.53	-0.5
43,649	+		HP15_p187g50	0.58	-0.5
43,745	+		HP15_p187g50	0.69	+2.4
43,762	-		HP15_p187g50	0.71	-1.5
43,782	-		HP15_p187g50	0.73	-2.0
44,143	+		HP15_p187g51	0.23	-0.3
44,151	-		HP15_p187g51	0.25	-1.4
44,161	-		HP15_p187g51	0.27	-1.6
44,161	-		HP15_p187g51	0.27	+0.2
44,166	-		HP15_p187g51	0.27	-2.6
44,219	+		HP15_p187g51	0.37	+1.6
44,222	-		HP15_p187g51	0.38	+2.0
44,227	-		HP15_p187g51	0.39	+1.0
44,243	+		HP15_p187g51	0.42	+2.0
44,262	+		HP15_p187g51	0.45	-2.2
44,262	+		HP15_p187g51	0.45	-1.3
44,263	+		HP15_p187g51	0.45	+0.5
44,271	-		HP15_p187g51	0.47	-0.4
44,308	+		HP15_p187g51	0.53	-1.8
44,308	+		HP15_p187g51	0.53	+0.6
44,316	-		HP15_p187g51	0.55	-0.9
44,316	-		HP15_p187g51	0.55	-0.4
44,332	+		HP15_p187g51	0.58	-0.8
44,339	+		HP15_p187g51	0.59	+0.7
44,344	+		HP15_p187g51	0.60	-1.4
44,347	-		HP15_p187g51	0.61	-0.6
44,391	-		HP15_p187g51	0.69	-2.3
44,425	-		HP15_p187g51	0.75	+1.7
44,457	+		HP15_p187g51	0.81	+0.4
44,465	-		HP15_p187g51	0.82	+1.0
44,494	+		HP15_p187g51	0.88	-0.8
44,534	+				-1.0
44,534	+				-0.7
44,537	-				-1.6
44,537	-				+0.2
44,667	-				+2.6
44,691	+		HP15_p187g52	0.29	+0.1
44,758	+		HP15_p187g52	0.85	+1.9
44,775	+				-0.2
44,775	+				+1.8
44,775	+				-0.3
44,775	+				+0.1
44,783	-				-1.3
44,783	-				-1.6
44,783	-				-1.2
44,783	-				+2.5
44,783	-				+1.7
44,783	-				-0.4
44,783	-				+1.7
44,884	+				+1.6
44,906	-				-1.8
44,910	+				+2.1
44,942	-				-0.6
44,942	-				-1.7
44,942	-				-0.8
44,950	+				-2.2
44,950	-				+2.2
44,961	+				-0.1
44,965	-				-1.1
44,965	-				+1.1