Strain Fitness in Marinobacter adhaerens HP15 around HP15_4002

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,233,934	+				+0.5
4,234,017	-				+1.2
4,234,287	+		HP15_4001	0.38	-0.6
4,234,287	+		HP15_4001	0.38	-0.3
4,234,297	-		HP15_4001	0.40	-0.5
4,234,368	+		HP15_4001	0.56	+0.2
4,234,574	-				-1.0
4,234,622	+				-0.3
4,234,630	-				-1.3
4,234,666	-				+2.1
4,234,811	-				+2.4
4,234,834	-				-0.5
4,235,033	+		HP15_4002	0.25	+1.7
4,235,067	+		HP15_4002	0.28	-1.0
4,235,085	-		HP15_4002	0.30	-1.0
4,235,115	-		HP15_4002	0.32	-0.9
4,235,205	+		HP15_4002	0.39	+2.3
4,235,236	+		HP15_4002	0.42	+2.6
4,235,262	-		HP15_4002	0.44	-1.2
4,235,277	-		HP15_4002	0.45	-0.9
4,235,326	+		HP15_4002	0.49	+1.9
4,235,326	+		HP15_4002	0.49	-0.8
4,235,453	+		HP15_4002	0.59	-0.8
4,235,470	+		HP15_4002	0.61	-1.6
4,235,478	-		HP15_4002	0.61	-1.2
4,235,568	-		HP15_4002	0.69	+2.3
4,235,705	+		HP15_4002	0.80	-0.0
4,235,713	-		HP15_4002	0.80	+1.0
4,235,735	+		HP15_4002	0.82	-0.4
4,235,847	-				+1.7
4,235,887	+				-0.6
4,235,887	+				-1.2
4,235,887	+				-2.6
4,235,900	-				-0.1
4,235,922	-				-1.3
4,236,002	+				+1.0
4,236,073	+				+1.3
4,236,088	-				+0.3
4,236,088	-				-0.7
4,236,112	+				-0.3
4,236,119	-				-0.7
4,236,142	+				+1.0
4,236,156	-				-0.8
4,236,160	-				-1.0
4,236,161	+				+2.7
4,236,169	-				-0.6
4,236,169	-				-0.9
4,236,216	+				-1.2
4,236,225	-				-0.1
4,236,315	+				-1.5
4,236,326	+		HP15_4003	0.10	-0.7
4,236,334	-		HP15_4003	0.10	-0.7
4,236,335	+		HP15_4003	0.10	+2.3
4,236,335	+		HP15_4003	0.10	-2.2
4,236,344	-		HP15_4003	0.11	+0.0
4,236,646	-		HP15_4003	0.20	-0.1
4,236,664	-		HP15_4003	0.21	+0.3
4,236,684	+		HP15_4003	0.22	+1.4
4,236,900	+		HP15_4003	0.29	-1.5
4,236,912	+		HP15_4003	0.29	+0.4