Strain Fitness in Marinobacter adhaerens HP15 around HP15_3984

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,214,309	-		HP15_3982	0.49	+1.2
4,214,345	+		HP15_3982	0.51	-0.9
4,214,353	-		HP15_3982	0.52	+0.5
4,214,496	+		HP15_3982	0.63	-0.5
4,214,525	+		HP15_3982	0.65	-1.2
4,214,533	-		HP15_3982	0.66	-0.0
4,214,533	-		HP15_3982	0.66	-0.1
4,214,533	-		HP15_3982	0.66	+0.3
4,214,552	+		HP15_3982	0.68	+1.4
4,214,591	+		HP15_3982	0.71	-1.3
4,214,599	-		HP15_3982	0.71	-1.5
4,214,640	-		HP15_3982	0.75	+0.5
4,214,692	-		HP15_3982	0.79	-1.2
4,214,729	+		HP15_3982	0.82	-0.3
4,214,770	-		HP15_3982	0.85	-1.2
4,214,770	-		HP15_3982	0.85	+0.6
4,214,785	-		HP15_3982	0.86	+1.9
4,214,834	+		HP15_3982	0.90	-1.7
4,215,015	-				+0.1
4,215,074	+				+0.8
4,215,089	+				+1.8
4,215,089	+				-1.6
4,215,176	+		HP15_3983	0.76	+0.1
4,215,184	+		HP15_3983	0.82	+0.3
4,215,228	+				-0.2
4,215,228	+				+0.1
4,215,228	+				-0.5
4,215,229	-				-0.6
4,215,236	-				+0.3
4,215,236	-				+0.1
4,215,236	-				+1.7
4,215,236	-				+2.0
4,215,273	-				-0.6
4,215,366	-				-0.4
4,215,469	-				-0.3
4,215,519	-		HP15_3984	0.12	+1.4
4,215,528	-		HP15_3984	0.12	-1.8
4,215,612	-		HP15_3984	0.17	-0.4
4,215,644	-		HP15_3984	0.19	+1.9
4,215,676	+		HP15_3984	0.20	+2.4
4,215,713	+		HP15_3984	0.22	-0.6
4,215,905	-		HP15_3984	0.33	-0.3
4,215,919	+		HP15_3984	0.34	+1.9
4,215,919	+		HP15_3984	0.34	-0.0
4,215,923	-		HP15_3984	0.34	-1.1
4,216,029	-		HP15_3984	0.40	+0.1
4,216,036	+		HP15_3984	0.40	+0.1
4,216,109	+		HP15_3984	0.44	-0.9
4,216,148	+		HP15_3984	0.47	+2.0
4,216,166	-		HP15_3984	0.48	+0.3
4,216,265	+		HP15_3984	0.53	+1.9
4,216,427	-		HP15_3984	0.62	+3.5
4,216,438	+		HP15_3984	0.63	+0.0
4,216,442	-		HP15_3984	0.63	-0.1
4,216,494	+		HP15_3984	0.66	-0.9
4,216,512	-		HP15_3984	0.67	-1.1
4,216,558	+		HP15_3984	0.69	+4.3
4,216,566	-		HP15_3984	0.70	+0.1
4,216,609	-		HP15_3984	0.72	+1.9
4,216,616	-		HP15_3984	0.73	+1.5
4,216,621	-		HP15_3984	0.73	-0.1
4,216,639	+		HP15_3984	0.74	+0.8
4,216,639	+		HP15_3984	0.74	-0.6
4,216,677	-		HP15_3984	0.76	+2.0
4,216,728	+		HP15_3984	0.79	-0.9
4,216,833	+		HP15_3984	0.85	+1.7
4,216,857	+		HP15_3984	0.86	+2.2
4,217,009	-				+2.1
4,217,017	-				-1.2
4,217,023	+				+0.1
4,217,028	+				-1.9
4,217,044	+				+1.9
4,217,066	-				-2.5
4,217,077	+				-1.0
4,217,252	+				-0.7
4,217,260	-				+0.5
4,217,276	-				-0.7
4,217,287	-				-0.4
4,217,329	+				+0.2
4,217,334	+				+0.2
4,217,494	-		HP15_3985	0.13	-0.1
4,217,577	+		HP15_3985	0.18	-0.1
4,217,621	+		HP15_3985	0.21	+2.7
4,217,814	+		HP15_3985	0.34	+1.7
4,217,821	+		HP15_3985	0.34	+0.1
4,217,826	+		HP15_3985	0.35	-1.7
4,217,853	+		HP15_3985	0.36	+1.7
4,217,861	-		HP15_3985	0.37	-0.1
4,218,050	-		HP15_3985	0.49	+1.4