Strain Fitness in Marinobacter adhaerens HP15 around HP15_3884

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,112,708	-		HP15_3882	0.90	+1.6
4,112,748	-				+2.1
4,112,780	-				+0.3
4,112,787	+				-0.5
4,112,796	+				-2.1
4,112,880	+				-0.7
4,112,911	+				-0.2
4,112,978	-		HP15_3883	0.17	-1.0
4,112,986	-		HP15_3883	0.19	-0.6
4,113,176	+		HP15_3883	0.54	+2.4
4,113,184	-		HP15_3883	0.56	+2.1
4,113,191	+		HP15_3883	0.57	-1.7
4,113,366	+				+0.8
4,113,409	-				+0.9
4,113,629	+				-1.7
4,113,670	+				+0.4
4,113,691	-				-0.9
4,113,744	+				+1.8
4,113,753	+				-0.8
4,113,913	+		HP15_3884	0.18	+0.4
4,113,913	+		HP15_3884	0.18	-1.0
4,113,921	-		HP15_3884	0.18	-0.5
4,114,111	+		HP15_3884	0.29	+2.4
4,114,136	-		HP15_3884	0.31	-0.9
4,114,332	+		HP15_3884	0.43	-1.5
4,114,431	-		HP15_3884	0.49	+1.4
4,114,503	+		HP15_3884	0.53	+2.2
4,114,659	+		HP15_3884	0.62	+0.2
4,114,677	-		HP15_3884	0.63	-0.5
4,114,713	-		HP15_3884	0.66	+0.3
4,114,762	-		HP15_3884	0.68	-0.2
4,114,794	-		HP15_3884	0.70	+1.4
4,114,802	-		HP15_3884	0.71	+1.8
4,114,860	-		HP15_3884	0.74	-0.1
4,114,871	+		HP15_3884	0.75	-0.7
4,114,879	-		HP15_3884	0.75	-1.9
4,114,905	+		HP15_3884	0.77	-0.5
4,114,905	+		HP15_3884	0.77	-0.6
4,114,907	+		HP15_3884	0.77	+0.2
4,114,913	-		HP15_3884	0.78	+1.1
4,114,913	-		HP15_3884	0.78	-1.2
4,114,924	+		HP15_3884	0.78	+0.1
4,114,924	+		HP15_3884	0.78	-0.1
4,114,924	+		HP15_3884	0.78	-1.9
4,114,924	+		HP15_3884	0.78	+2.7
4,114,932	-		HP15_3884	0.79	-1.2
4,114,932	-		HP15_3884	0.79	+2.7
4,114,946	-		HP15_3884	0.79	-0.5
4,114,946	-		HP15_3884	0.79	+0.4
4,114,964	+		HP15_3884	0.81	-0.1
4,115,039	+		HP15_3884	0.85	+1.9
4,115,047	-		HP15_3884	0.86	+0.1
4,115,054	+		HP15_3884	0.86	+2.6
4,115,092	-		HP15_3884	0.88	+1.9
4,115,138	-				+0.3
4,115,258	+				+1.6
4,115,268	-				-1.1
4,115,341	-				+0.8
4,115,434	+				+0.2
4,115,442	-				-0.0
4,115,442	-				+3.9
4,115,442	-				+0.9
4,115,457	-				+0.2
4,115,483	+				-0.2
4,115,491	-				+1.1
4,115,491	-				+0.7
4,115,503	-				-1.7
4,115,550	-		HP15_3885	0.15	+2.3
4,115,555	-		HP15_3885	0.16	-2.1
4,115,646	+		HP15_3885	0.26	+2.4
4,116,002	+		HP15_3885	0.68	+1.8
4,116,087	+		HP15_3885	0.78	-0.8
4,116,087	+				-0.7
4,116,112	+		HP15_3885	0.81	+1.1
4,116,112	+		HP15_3885	0.81	-0.7
4,116,160	+		HP15_3885	0.87	+0.8
4,116,164	-		HP15_3885	0.87	+2.1
4,116,176	+		HP15_3885	0.89	-0.5
4,116,181	+		HP15_3885	0.89	+1.4
4,116,268	-				+1.8
4,116,268	-				-1.2