Strain Fitness in Marinobacter adhaerens HP15 around HP15_3820

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,045,131	+		HP15_3819	0.19	+1.7
4,045,382	-		HP15_3819	0.46	+2.0
4,045,606	+		HP15_3819	0.70	+1.8
4,045,774	+		HP15_3819	0.87	+0.6
4,045,917	-				+0.8
4,046,009	+				-0.3
4,046,029	+				+2.3
4,046,037	-				-1.2
4,046,056	+				+1.5
4,046,056	+				-0.6
4,046,117	-				-0.5
4,046,117	-				-0.5
4,046,141	+				+0.9
4,046,178	+				+0.3
4,046,186	-				+2.0
4,046,213	+				+3.2
4,046,268	+		HP15_3820	0.11	+1.4
4,046,299	-		HP15_3820	0.14	-0.1
4,046,306	-		HP15_3820	0.14	-0.5
4,046,350	+		HP15_3820	0.18	-0.1
4,046,382	+		HP15_3820	0.20	+0.8
4,046,670	+		HP15_3820	0.42	-0.4
4,046,688	-		HP15_3820	0.44	+2.0
4,046,748	+		HP15_3820	0.49	+0.5
4,046,803	-		HP15_3820	0.53	-1.8
4,046,803	-		HP15_3820	0.53	+1.1
4,046,816	+		HP15_3820	0.54	+1.5
4,046,922	+		HP15_3820	0.62	+1.0
4,046,960	+		HP15_3820	0.65	+1.2
4,046,960	+		HP15_3820	0.65	+0.3
4,046,991	+		HP15_3820	0.67	+2.9
4,046,999	-		HP15_3820	0.68	+0.0
4,047,001	+		HP15_3820	0.68	+1.7
4,047,015	+		HP15_3820	0.69	+2.2
4,047,024	+		HP15_3820	0.70	-0.3
4,047,119	-		HP15_3820	0.77	+0.1
4,047,119	-		HP15_3820	0.77	-1.0
4,047,165	+		HP15_3820	0.81	+0.2
4,047,259	-		HP15_3820	0.88	+2.0
4,047,285	-				-2.5
4,047,383	+				-2.1
4,047,715	-		HP15_3821	0.34	-0.1
4,047,715	-		HP15_3821	0.34	+1.4
4,047,774	-		HP15_3821	0.48	-0.4
4,047,776	+		HP15_3821	0.48	+0.2
4,047,776	+		HP15_3821	0.48	+0.4
4,047,784	-		HP15_3821	0.50	+0.1
4,047,896	-		HP15_3821	0.76	+0.7
4,047,934	-		HP15_3821	0.85	+1.2
4,047,975	-				+0.4
4,048,055	+				-0.7
4,048,073	-				+0.2
4,048,093	+				+2.2
4,048,106	+				+1.5
4,048,216	-		HP15_3822	0.16	+1.9
4,048,241	+		HP15_3822	0.17	-0.5
4,048,242	+		HP15_3822	0.17	-0.1
4,048,280	+		HP15_3822	0.20	+0.1
4,048,337	-		HP15_3822	0.24	+0.4
4,048,377	+		HP15_3822	0.27	+2.0
4,048,385	-		HP15_3822	0.28	-0.2