Strain Fitness in Marinobacter adhaerens HP15 around HP15_3802

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,027,063	+		HP15_3801	0.25	-0.5
4,027,073	+		HP15_3801	0.26	-0.5
4,027,081	-		HP15_3801	0.27	+2.3
4,027,160	-		HP15_3801	0.33	+0.1
4,027,232	+		HP15_3801	0.39	+2.1
4,027,307	+		HP15_3801	0.46	+0.5
4,027,312	+		HP15_3801	0.46	+0.2
4,027,312	+		HP15_3801	0.46	+1.4
4,027,350	+		HP15_3801	0.49	-2.4
4,027,459	+		HP15_3801	0.58	+0.7
4,027,534	+		HP15_3801	0.65	+2.3
4,027,552	-		HP15_3801	0.66	-0.3
4,027,645	+		HP15_3801	0.74	-0.6
4,027,688	-		HP15_3801	0.78	+2.1
4,027,704	+		HP15_3801	0.79	+2.2
4,027,825	+		HP15_3801	0.89	+0.8
4,027,856	+				+2.0
4,027,864	-				-0.7
4,027,879	+				+1.7
4,027,921	-				+1.6
4,027,958	-				+0.2
4,028,070	+		HP15_3802	0.24	+1.4
4,028,070	+		HP15_3802	0.24	+1.0
4,028,078	-		HP15_3802	0.25	-1.0
4,028,114	+		HP15_3802	0.33	-0.1
4,028,138	+		HP15_3802	0.38	-0.8
4,028,138	+		HP15_3802	0.38	+0.4
4,028,141	-		HP15_3802	0.39	-0.8
4,028,312	-		HP15_3802	0.75	-2.2
4,028,375	+		HP15_3802	0.88	-1.3
4,028,461	+				+2.0
4,028,469	-				-0.8
4,028,501	-				+0.5
4,028,672	+				-1.8
4,028,679	+				-1.0
4,028,680	-				-0.3
4,028,687	-				-0.4
4,028,687	-				-1.2
4,028,877	-		HP15_3803	0.22	+0.1
4,028,888	+		HP15_3803	0.23	+1.7
4,028,981	-		HP15_3803	0.30	-0.2
4,028,981	-		HP15_3803	0.30	-0.1
4,029,043	+		HP15_3803	0.35	+2.2
4,029,103	-		HP15_3803	0.40	-0.0
4,029,103	-		HP15_3803	0.40	+0.4
4,029,114	-		HP15_3803	0.41	+2.2
4,029,139	-		HP15_3803	0.43	-0.7
4,029,273	-		HP15_3803	0.54	-1.3
4,029,301	+		HP15_3803	0.56	-0.0
4,029,302	-		HP15_3803	0.56	+1.1
4,029,302	-		HP15_3803	0.56	-0.6
4,029,333	+		HP15_3803	0.59	+0.4
4,029,353	-		HP15_3803	0.60	+2.6
4,029,394	-		HP15_3803	0.64	-1.0