Strain Fitness in Marinobacter adhaerens HP15 around HP15_3166

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
3,318,711	-		HP15_3164	0.89	+1.7
3,318,757	+				-0.4
3,318,808	+				+0.1
3,318,813	+				-1.0
3,318,821	-				-0.4
3,318,843	-				+2.5
3,318,932	+				+1.4
3,318,968	+				+1.9
3,318,993	-				-1.4
3,319,096	-		HP15_3165	0.17	+1.7
3,319,116	+		HP15_3165	0.20	-0.3
3,319,121	+		HP15_3165	0.21	+2.7
3,319,176	+		HP15_3165	0.29	+2.0
3,319,184	-		HP15_3165	0.30	+1.5
3,319,184	-		HP15_3165	0.30	-0.9
3,319,318	+		HP15_3165	0.51	-0.4
3,319,363	+		HP15_3165	0.58	+0.3
3,319,371	+		HP15_3165	0.59	-0.6
3,319,371	-		HP15_3165	0.59	-1.3
3,319,432	+		HP15_3165	0.68	+1.9
3,319,440	-		HP15_3165	0.69	-0.0
3,319,483	+		HP15_3165	0.76	+3.0
3,319,551	+		HP15_3165	0.86	+2.4
3,319,599	+				+2.3
3,319,599	+				-0.5
3,319,607	-				-1.5
3,319,607	-				-1.0
3,319,617	+				-0.1
3,319,696	-				+2.1
3,319,777	+		HP15_3166	0.19	+0.1
3,319,872	+		HP15_3166	0.33	-0.6
3,320,188	+		HP15_3166	0.82	+0.5
3,320,193	+		HP15_3166	0.82	+3.4
3,320,205	-		HP15_3166	0.84	+0.7
3,320,206	-		HP15_3166	0.84	+1.1
3,320,423	-				+0.1
3,320,484	+		HP15_3167	0.15	+0.0
3,320,492	-		HP15_3167	0.15	-0.3
3,320,492	-		HP15_3167	0.15	-1.9
3,320,492	-		HP15_3167	0.15	-1.4
3,320,568	-		HP15_3167	0.21	-1.1
3,320,623	+		HP15_3167	0.26	+0.5
3,320,628	+		HP15_3167	0.26	-1.8
3,320,638	-		HP15_3167	0.27	-0.3
3,320,854	-		HP15_3167	0.45	-0.9
3,320,874	+		HP15_3167	0.46	-0.7
3,320,962	+		HP15_3167	0.54	+0.6
3,320,975	-		HP15_3167	0.55	-0.1
3,321,039	-		HP15_3167	0.60	+2.0
3,321,091	-		HP15_3167	0.64	-0.6
3,321,091	-		HP15_3167	0.64	-0.1
3,321,091	-		HP15_3167	0.64	+0.7
3,321,236	+		HP15_3167	0.76	-1.0
3,321,244	-		HP15_3167	0.77	+2.1