Strain Fitness in Marinobacter adhaerens HP15 around HP15_3029

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
3,172,959	+		HP15_3028	0.48	+0.2
3,173,021	+		HP15_3028	0.53	-0.1
3,173,021	+		HP15_3028	0.53	-1.6
3,173,024	-		HP15_3028	0.54	+1.3
3,173,029	-		HP15_3028	0.54	-0.8
3,173,029	-		HP15_3028	0.54	+0.0
3,173,029	-		HP15_3028	0.54	-0.8
3,173,117	-		HP15_3028	0.62	+0.7
3,173,136	+		HP15_3028	0.63	-0.4
3,173,162	+		HP15_3028	0.65	+0.0
3,173,162	+		HP15_3028	0.65	+0.4
3,173,170	-		HP15_3028	0.66	-1.0
3,173,170	-		HP15_3028	0.66	-0.3
3,173,172	+		HP15_3028	0.66	+0.6
3,173,175	-		HP15_3028	0.66	-1.1
3,173,175	-		HP15_3028	0.66	-0.3
3,173,181	+		HP15_3028	0.67	-2.1
3,173,181	+		HP15_3028	0.67	+1.9
3,173,189	-		HP15_3028	0.68	+0.2
3,173,211	-		HP15_3028	0.69	+0.2
3,173,211	-		HP15_3028	0.69	-0.7
3,173,213	+		HP15_3028	0.70	-0.5
3,173,221	-		HP15_3028	0.70	+2.2
3,173,221	-		HP15_3028	0.70	-0.8
3,173,322	+		HP15_3028	0.79	-0.4
3,173,383	+		HP15_3028	0.84	+0.9
3,173,386	-		HP15_3028	0.84	+2.1
3,173,386	-		HP15_3028	0.84	+1.5
3,173,391	-		HP15_3028	0.85	+0.0
3,173,391	-		HP15_3028	0.85	-0.9
3,173,391	-		HP15_3028	0.85	-1.3
3,173,472	-				+0.4
3,173,628	-				-1.3
3,173,683	-				-0.9
3,173,687	-				-0.8
3,173,765	-				-0.4
3,173,770	+				+1.8
3,174,036	+		HP15_3029	0.34	+1.5
3,174,289	-		HP15_3029	0.68	-2.3
3,174,291	+		HP15_3029	0.68	+1.6
3,174,365	+		HP15_3029	0.78	+2.5
3,174,415	-		HP15_3029	0.84	+0.6
3,174,417	+		HP15_3029	0.85	-0.8
3,174,497	+				+1.9
3,174,613	+				+0.4
3,174,703	+				+0.0
3,174,711	+				-0.3
3,174,731	+				-0.5
3,174,739	-				-0.2
3,174,740	+				+1.6
3,174,741	+				+0.4
3,174,750	+				-0.3
3,174,814	-		HP15_3030	0.16	-0.6
3,174,839	+		HP15_3030	0.20	+0.0
3,174,839	+		HP15_3030	0.20	-2.2
3,174,900	+		HP15_3030	0.27	+2.0
3,174,908	-		HP15_3030	0.29	+0.7
3,174,926	-		HP15_3030	0.31	+0.3
3,175,128	+		HP15_3030	0.57	+0.6
3,175,128	+		HP15_3030	0.57	+0.0
3,175,128	+		HP15_3030	0.57	-0.6
3,175,136	-		HP15_3030	0.58	-0.6
3,175,212	-		HP15_3030	0.68	-0.3
3,175,258	+		HP15_3030	0.74	+0.7
3,175,260	+		HP15_3030	0.74	+2.4
3,175,368	+		HP15_3030	0.88	+1.5
3,175,427	+				-0.3
3,175,440	-				-0.1
3,175,465	+				-0.4
3,175,478	-				+0.7
3,175,478	-				-1.5