Strain Fitness in Marinobacter adhaerens HP15 around HP15_2854

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,994,182	-		HP15_2853	0.35	-0.2
2,994,199	-		HP15_2853	0.36	+1.9
2,994,258	-		HP15_2853	0.40	-0.4
2,994,298	+		HP15_2853	0.43	-0.3
2,994,430	+		HP15_2853	0.52	+1.5
2,994,438	-		HP15_2853	0.53	-0.0
2,994,633	-		HP15_2853	0.66	-0.4
2,994,684	-		HP15_2853	0.70	-1.5
2,994,780	-		HP15_2853	0.76	-0.8
2,994,780	-		HP15_2853	0.76	+0.0
2,994,787	-		HP15_2853	0.77	-0.3
2,994,814	+		HP15_2853	0.79	+0.0
2,995,149	-				-0.4
2,995,149	-				-0.1
2,995,149	-				-1.6
2,995,149	-				-1.9
2,995,167	+				+0.9
2,995,167	-				-1.1
2,995,184	+				+1.3
2,995,202	+				-1.5
2,995,310	+		HP15_2854	0.32	-0.3
2,995,371	-		HP15_2854	0.46	-0.4
2,995,431	-		HP15_2854	0.59	+2.0
2,995,432	+		HP15_2854	0.59	+2.6
2,995,432	+		HP15_2854	0.59	+0.2
2,995,432	+		HP15_2854	0.59	+2.4
2,995,435	-		HP15_2854	0.60	+2.0
2,995,508	+		HP15_2854	0.77	-0.4
2,995,531	-		HP15_2854	0.82	+0.3
2,995,668	-				+0.3
2,995,763	+				+0.1
2,995,810	-				-0.9
2,995,833	-				+1.1
2,995,860	+				-0.7
2,995,868	-				-0.8
2,995,924	+				-0.1
2,995,932	-				-1.1
2,996,028	+				+1.1
2,996,169	+		HP15_2855	0.15	-0.5
2,996,177	+		HP15_2855	0.16	-1.2
2,996,235	+		HP15_2855	0.24	+0.4
2,996,245	+		HP15_2855	0.25	-0.4
2,996,255	-		HP15_2855	0.26	+0.1
2,996,296	+		HP15_2855	0.32	+0.2
2,996,343	-		HP15_2855	0.38	-0.3
2,996,366	-		HP15_2855	0.41	-0.3
2,996,391	+		HP15_2855	0.44	+0.3
2,996,402	+		HP15_2855	0.46	+2.1
2,996,434	-		HP15_2855	0.50	-0.5
2,996,510	-		HP15_2855	0.60	+0.5
2,996,525	-		HP15_2855	0.61	+0.7
2,996,530	+		HP15_2855	0.62	-0.7
2,996,530	+		HP15_2855	0.62	+0.6
2,996,566	+		HP15_2855	0.67	+1.9