Strain Fitness in Marinobacter adhaerens HP15 around HP15_27

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
29,922	+		HP15_26	0.66	-0.1
29,941	+		HP15_26	0.67	-0.1
29,941	+		HP15_26	0.67	-1.4
29,944	-		HP15_26	0.68	-1.0
29,949	-		HP15_26	0.68	+2.2
29,949	-		HP15_26	0.68	+0.5
29,963	+		HP15_26	0.69	+1.5
29,970	+		HP15_26	0.70	+2.0
30,000	+		HP15_26	0.72	-0.5
30,021	+		HP15_26	0.74	-2.0
30,128	-		HP15_26	0.83	-1.8
30,203	+		HP15_26	0.89	-0.0
30,203	+		HP15_26	0.89	+1.6
30,268	+				-1.3
30,276	-				-0.0
30,341	+				+1.0
30,359	-				-0.0
30,412	-				-0.8
30,470	+				-0.4
30,488	-				-0.1
30,496	+				-1.3
30,504	-				+1.9
30,513	+				-0.9
30,513	-				+1.5
30,564	+				+1.4
30,590	-				-2.8
30,604	-				-0.1
30,665	+				-0.7
30,671	+				-0.9
30,740	+				-1.3
30,741	-				+1.8
30,746	-				-0.7
30,847	+				-0.7
30,850	+				+1.1
30,858	-				+0.1
30,858	-				+0.7
30,914	+				-0.7
30,914	+				-1.2
30,922	-				+1.5
30,922	-				-1.5
30,968	+				+2.0
30,998	-				-0.0
31,048	+				-0.1
31,050	+				-0.1
31,056	-		HP15_27	0.10	-0.5
31,113	+		HP15_27	0.15	-2.2
31,115	-		HP15_27	0.15	-0.9
31,128	-		HP15_27	0.16	+0.7
31,174	+		HP15_27	0.19	-1.1
31,174	+		HP15_27	0.19	+2.3
31,174	+		HP15_27	0.19	+1.4
31,174	+		HP15_27	0.19	-0.6
31,174	+		HP15_27	0.19	-0.6
31,182	-		HP15_27	0.20	+0.3
31,182	-		HP15_27	0.20	+0.2
31,184	+		HP15_27	0.20	+0.1
31,184	+		HP15_27	0.20	+2.0
31,191	+		HP15_27	0.21	-0.3
31,211	+		HP15_27	0.22	+0.5
31,211	+		HP15_27	0.22	-1.9
31,219	-		HP15_27	0.23	-0.2
31,220	-		HP15_27	0.23	-0.3
31,244	+		HP15_27	0.25	+0.6
31,244	+		HP15_27	0.25	+0.1
31,252	-		HP15_27	0.25	-0.3
31,252	-		HP15_27	0.25	-1.7
31,252	-		HP15_27	0.25	+2.3
31,255	+		HP15_27	0.26	+1.4
31,255	+		HP15_27	0.26	+1.4
31,257	-		HP15_27	0.26	+1.5
31,262	-		HP15_27	0.26	-0.5
31,274	+		HP15_27	0.27	-0.6
31,282	-		HP15_27	0.28	-0.3
31,313	-		HP15_27	0.30	-0.0
31,434	-		HP15_27	0.39	+1.2
31,535	-		HP15_27	0.47	-0.4
31,819	+		HP15_27	0.69	+1.8
31,820	-		HP15_27	0.69	+1.7
31,827	-		HP15_27	0.70	-0.3
31,827	-		HP15_27	0.70	-0.4
31,871	-		HP15_27	0.73	-1.1
31,881	-		HP15_27	0.74	+0.0
31,998	+		HP15_27	0.83	+0.9
31,999	+		HP15_27	0.83	+2.4
32,007	-		HP15_27	0.84	+0.0
32,046	-		HP15_27	0.87	-0.2
32,123	+				-0.1
32,131	-				-1.5
32,201	-				-0.2
32,205	-				-1.1
32,246	+				+2.0
32,247	-				+0.1
32,316	-				-1.0
32,332	+				+0.2
32,446	+				+0.7
32,457	+				+2.1
32,460	-				-1.7
32,460	-				+2.4
32,484	-				+0.9
32,484	-				+2.4
32,523	+				-0.6
32,531	-				+1.2
32,620	+				-0.4
32,635	-				+0.2
32,669	+		HP15_28	0.12	-1.6
32,669	+		HP15_28	0.12	+1.2
32,696	+		HP15_28	0.15	-0.2
32,711	+		HP15_28	0.16	+2.1
32,719	-		HP15_28	0.16	+1.8
32,768	+		HP15_28	0.20	-0.0
32,768	+		HP15_28	0.20	-0.0
32,844	+		HP15_28	0.26	+2.0
32,872	+		HP15_28	0.28	-0.3
32,880	-		HP15_28	0.29	+1.3
32,887	-		HP15_28	0.30	+1.6
32,891	+		HP15_28	0.30	+1.1
32,974	-		HP15_28	0.36	+1.9
32,986	+		HP15_28	0.37	+3.7
32,998	+		HP15_28	0.38	-1.0
32,998	+		HP15_28	0.38	+2.1
33,014	+		HP15_28	0.40	-0.2
33,022	-		HP15_28	0.40	-0.5
33,032	-		HP15_28	0.41	-0.6
33,098	+		HP15_28	0.46	-2.6
33,106	-		HP15_28	0.47	-0.6
33,114	-		HP15_28	0.47	+1.9
33,173	-		HP15_28	0.52	+1.8
33,181	+		HP15_28	0.53	+1.0