Strain Fitness in Marinobacter adhaerens HP15 around HP15_2510
Experiment: monoculture; Experiment B, time point 5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 5 |
---|---|---|---|---|---|
remove | |||||
2,649,311 | - | HP15_2508 | 0.29 | +1.6 | |
2,649,339 | - | HP15_2508 | 0.33 | +1.4 | |
2,649,368 | + | HP15_2508 | 0.37 | +0.6 | |
2,649,403 | + | HP15_2508 | 0.41 | -0.0 | |
2,649,474 | - | HP15_2508 | 0.51 | +2.0 | |
2,649,487 | - | HP15_2508 | 0.53 | +1.8 | |
2,649,514 | + | HP15_2508 | 0.56 | +1.6 | |
2,649,577 | + | HP15_2508 | 0.65 | +1.7 | |
2,649,602 | - | HP15_2508 | 0.68 | +1.4 | |
2,649,649 | + | HP15_2508 | 0.75 | +0.1 | |
2,649,667 | + | HP15_2508 | 0.77 | +0.6 | |
2,649,667 | + | HP15_2508 | 0.77 | +2.0 | |
2,649,733 | - | HP15_2508 | 0.86 | +1.8 | |
2,649,830 | + | +2.0 | |||
2,650,068 | + | HP15_2509 | 0.61 | +1.5 | |
2,650,076 | - | HP15_2509 | 0.68 | +1.7 | |
2,650,221 | + | HP15_2510 | 0.16 | +0.6 | |
2,650,284 | + | HP15_2510 | 0.23 | -0.5 | |
2,650,325 | - | HP15_2510 | 0.28 | +2.7 | |
2,650,468 | - | HP15_2510 | 0.45 | +1.2 | |
2,650,556 | - | HP15_2510 | 0.55 | +0.7 | |
2,650,602 | - | HP15_2510 | 0.61 | +0.8 | |
2,650,687 | + | HP15_2510 | 0.71 | +1.0 | |
2,650,809 | + | HP15_2510 | 0.85 | +0.2 | |
2,650,809 | + | HP15_2510 | 0.85 | +2.4 | |
2,650,817 | - | HP15_2510 | 0.86 | -1.7 | |
2,650,880 | + | +0.9 | |||
2,650,905 | - | +1.7 | |||
2,650,937 | - | +1.4 | |||
2,651,031 | - | -0.7 |
Or see this region's nucleotide sequence