Strain Fitness in Marinobacter adhaerens HP15 around HP15_2340

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,457,298	-		HP15_2338	0.67	-0.8
2,457,382	+		HP15_2338	0.79	-0.0
2,457,414	-		HP15_2338	0.83	+2.0
2,457,576	-				+1.9
2,457,679	+		HP15_2339	0.15	-0.3
2,457,710	+				-0.7
2,457,718	+		HP15_2339	0.21	-0.5
2,457,855	+		HP15_2339	0.40	+0.2
2,457,946	+		HP15_2339	0.53	+0.9
2,457,957	+		HP15_2339	0.55	-0.7
2,457,965	-		HP15_2339	0.56	-1.0
2,458,041	-		HP15_2339	0.67	+1.7
2,458,062	+		HP15_2339	0.70	+2.2
2,458,065	-		HP15_2339	0.70	-0.0
2,458,070	-		HP15_2339	0.71	+2.5
2,458,070	-		HP15_2339	0.71	+1.8
2,458,135	-		HP15_2339	0.80	+0.2
2,458,157	-		HP15_2339	0.83	+0.9
2,458,269	+				-1.0
2,458,358	-				+2.0
2,458,544	+				-0.2
2,458,552	-				-1.0
2,458,569	+				-0.3
2,458,590	+				-0.7
2,458,665	+		HP15_2340	0.11	-0.4
2,458,679	+		HP15_2340	0.11	+1.6
2,458,679	+		HP15_2340	0.11	+1.5
2,458,687	-				+1.9
2,458,687	-		HP15_2340	0.11	+0.1
2,458,723	+		HP15_2340	0.12	-0.5
2,458,754	+		HP15_2340	0.13	-0.4
2,458,813	+		HP15_2340	0.15	-2.5
2,458,852	-		HP15_2340	0.16	-1.7
2,458,944	+		HP15_2340	0.18	+1.1
2,458,949	+		HP15_2340	0.18	+2.1
2,458,978	-		HP15_2340	0.19	+0.2
2,459,035	+		HP15_2340	0.21	-0.6
2,459,086	-		HP15_2340	0.22	-2.5
2,459,123	-		HP15_2340	0.23	-0.5
2,459,143	+		HP15_2340	0.23	-0.1
2,459,165	+		HP15_2340	0.24	+1.5
2,459,271	+		HP15_2340	0.27	-0.0
2,459,279	-		HP15_2340	0.27	-0.4
2,459,437	+		HP15_2340	0.31	-3.3
2,459,454	+		HP15_2340	0.32	+1.5
2,459,454	+		HP15_2340	0.32	+1.8
2,459,548	-		HP15_2340	0.34	+2.0
2,459,630	-		HP15_2340	0.37	-1.0
2,459,640	-		HP15_2340	0.37	-2.4
2,459,741	-		HP15_2340	0.40	+0.2
2,459,851	+		HP15_2340	0.43	-0.2
2,459,877	-		HP15_2340	0.43	+0.4
2,459,912	+		HP15_2340	0.44	-1.4
2,460,000	-		HP15_2340	0.47	-0.5
2,460,000	-		HP15_2340	0.47	+2.5
2,460,002	+		HP15_2340	0.47	-0.5
2,460,024	-		HP15_2340	0.47	-0.6
2,460,053	+		HP15_2340	0.48	+0.5
2,460,053	+		HP15_2340	0.48	-2.1
2,460,090	-		HP15_2340	0.49	-1.8
2,460,140	+		HP15_2340	0.51	-1.7
2,460,250	-		HP15_2340	0.54	-0.5
2,460,372	+		HP15_2340	0.57	-1.3
2,460,380	-		HP15_2340	0.57	+1.7
2,460,461	+		HP15_2340	0.59	+1.7
2,460,526	+		HP15_2340	0.61	+2.2
2,460,557	+		HP15_2340	0.62	+0.7
2,460,688	-		HP15_2340	0.65	-0.9
2,460,753	+		HP15_2340	0.67	+0.4
2,460,761	-		HP15_2340	0.67	+2.4
2,460,788	+		HP15_2340	0.68	+1.9
2,460,798	+		HP15_2340	0.68	-0.6
2,460,806	-		HP15_2340	0.69	-0.6
2,460,806	-		HP15_2340	0.69	-2.1
2,460,922	-		HP15_2340	0.72	-0.6
2,460,995	+		HP15_2340	0.74	-0.4
2,461,002	+		HP15_2340	0.74	-0.7
2,461,002	+		HP15_2340	0.74	-0.6
2,461,002	+		HP15_2340	0.74	-1.4
2,461,002	+		HP15_2340	0.74	-0.5
2,461,010	-		HP15_2340	0.74	-0.2
2,461,010	-		HP15_2340	0.74	-0.4
2,461,050	+		HP15_2340	0.75	-1.9
2,461,078	-		HP15_2340	0.76	-0.4
2,461,108	-		HP15_2340	0.77	-0.7
2,461,135	-		HP15_2340	0.78	+1.8
2,461,156	-		HP15_2340	0.78	-1.3
2,461,194	+		HP15_2340	0.79	-0.9
2,461,195	-		HP15_2340	0.79	-0.0
2,461,216	+		HP15_2340	0.80	-0.2
2,461,234	-		HP15_2340	0.80	-0.8
2,461,529	+		HP15_2340	0.88	+0.5
2,461,529	+		HP15_2340	0.88	-0.7
2,461,537	-		HP15_2340	0.88	+1.9
2,461,610	+				-0.8
2,461,625	+				+1.7
2,461,676	-				+0.7
2,461,804	+				-0.3
2,461,978	-				-0.2
2,462,020	-				+0.3
2,462,034	+				+0.0
2,462,041	+				+1.6
2,462,041	+				-1.0
2,462,049	-				-0.2
2,462,098	-				-0.7
2,462,143	-				+0.2
2,462,345	-		HP15_2341	0.19	-0.2
2,462,394	-		HP15_2341	0.22	-2.4
2,462,409	+		HP15_2341	0.23	+1.9
2,462,417	-		HP15_2341	0.23	-0.3
2,462,463	+		HP15_2341	0.26	-1.1
2,462,463	+		HP15_2341	0.26	-1.3
2,462,463	+		HP15_2341	0.26	-0.6
2,462,471	-		HP15_2341	0.26	-0.8
2,462,471	-		HP15_2341	0.26	+0.3
2,462,471	-		HP15_2341	0.26	-0.9
2,462,501	+		HP15_2341	0.28	+2.0
2,462,501	+		HP15_2341	0.28	+2.3
2,462,756	-		HP15_2341	0.44	-0.5
2,462,756	-		HP15_2341	0.44	-0.7
2,462,786	+		HP15_2341	0.45	-1.0
2,462,791	+		HP15_2341	0.46	-1.6
2,462,876	+		HP15_2341	0.51	+0.6