Strain Fitness in Marinobacter adhaerens HP15 around HP15_2166

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,272,932	-		HP15_2165	0.51	+2.4
2,272,942	-		HP15_2165	0.52	-0.0
2,273,024	-		HP15_2165	0.56	-0.4
2,273,131	+		HP15_2165	0.62	-0.2
2,273,139	-		HP15_2165	0.62	-1.1
2,273,181	+		HP15_2165	0.65	-0.7
2,273,189	-		HP15_2165	0.65	-1.5
2,273,235	+		HP15_2165	0.67	+2.2
2,273,375	+		HP15_2165	0.75	+2.6
2,273,410	+		HP15_2165	0.77	+5.0
2,273,410	+		HP15_2165	0.77	+2.9
2,273,419	+		HP15_2165	0.77	-2.3
2,273,651	-		HP15_2165	0.90	+0.5
2,273,657	+		HP15_2165	0.90	+0.9
2,273,657	+		HP15_2165	0.90	-0.5
2,273,665	-				+1.7
2,273,735	-				+2.0
2,273,814	+				-0.7
2,273,814	+				+0.1
2,273,907	+				+4.0
2,273,983	+				+2.0
2,273,993	+				+0.8
2,274,001	-				-0.2
2,274,121	+		HP15_2166	0.17	-0.0
2,274,298	+		HP15_2166	0.29	-1.4
2,274,399	-		HP15_2166	0.36	+1.6
2,274,583	+		HP15_2166	0.48	+0.3
2,274,632	+		HP15_2166	0.51	+4.5
2,274,728	+		HP15_2166	0.58	-0.8
2,274,784	+		HP15_2166	0.62	+0.5
2,274,810	+		HP15_2166	0.63	+1.7
2,274,851	+		HP15_2166	0.66	+0.4
2,274,990	-		HP15_2166	0.76	+0.4
2,274,996	-		HP15_2166	0.76	+0.2
2,274,996	-		HP15_2166	0.76	+0.7
2,275,027	-		HP15_2166	0.78	+3.9
2,275,116	-		HP15_2166	0.84	-0.7
2,275,127	+		HP15_2166	0.85	+0.4
2,275,300	-				-1.0
2,275,300	-				+0.0
2,275,324	-				+2.5
2,275,614	+				-0.2
2,275,643	-		HP15_2167	0.12	-2.0
2,275,649	+		HP15_2167	0.13	-0.8
2,275,649	+		HP15_2167	0.13	+0.2
2,275,708	+		HP15_2167	0.20	-0.1
2,275,828	-		HP15_2167	0.36	-0.5
2,276,029	-		HP15_2167	0.63	-0.3
2,276,188	-		HP15_2167	0.84	-0.6
2,276,295	-				+0.3