Strain Fitness in Marinobacter adhaerens HP15 around HP15_2048
Experiment: monoculture; Experiment B, time point 5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 5 |
---|---|---|---|---|---|
remove | |||||
2,145,875 | + | HP15_2047 | 0.31 | +2.2 | |
2,146,025 | + | HP15_2047 | 0.42 | -0.4 | |
2,146,186 | + | HP15_2047 | 0.54 | +1.6 | |
2,146,259 | - | HP15_2047 | 0.60 | -0.6 | |
2,146,411 | - | HP15_2047 | 0.71 | -1.2 | |
2,146,441 | - | HP15_2047 | 0.73 | +1.6 | |
2,146,617 | + | HP15_2047 | 0.87 | -1.0 | |
2,146,625 | - | HP15_2047 | 0.87 | -0.3 | |
2,146,676 | + | +0.4 | |||
2,146,875 | - | +0.2 | |||
2,146,922 | + | HP15_2048 | 0.12 | -1.7 | |
2,147,059 | - | HP15_2048 | 0.26 | +0.7 | |
2,147,107 | + | HP15_2048 | 0.30 | +1.3 | |
2,147,137 | + | HP15_2048 | 0.33 | +1.8 | |
2,147,197 | + | HP15_2048 | 0.39 | +1.5 | |
2,147,376 | - | HP15_2048 | 0.57 | +0.3 | |
2,147,537 | - | HP15_2048 | 0.72 | -2.1 | |
2,147,537 | - | HP15_2048 | 0.72 | -3.5 | |
2,147,719 | + | HP15_2048 | 0.90 | -0.5 |
Or see this region's nucleotide sequence