Strain Fitness in Marinobacter adhaerens HP15 around HP15_1964

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,079,744	-		HP15_1962	0.54	-0.3
2,079,813	+		HP15_1962	0.61	-0.0
2,079,891	+		HP15_1962	0.69	-0.3
2,080,050	-		HP15_1962	0.84	-1.6
2,080,189	+				-1.0
2,080,206	+				-0.4
2,080,214	-				+2.1
2,080,221	+				-0.5
2,080,221	+				+2.6
2,080,234	-				-0.4
2,080,330	-		HP15_1963	0.16	+2.0
2,080,387	-		HP15_1963	0.31	-0.1
2,080,391	-		HP15_1963	0.32	+1.2
2,080,448	+		HP15_1963	0.48	-1.1
2,080,456	-		HP15_1963	0.50	+1.1
2,080,456	-		HP15_1963	0.50	-0.8
2,080,548	-		HP15_1963	0.75	-1.4
2,080,576	-		HP15_1963	0.82	-0.4
2,080,618	-				-1.1
2,080,618	-				-0.2
2,080,754	+				+0.1
2,080,762	-				-1.8
2,080,765	+				+0.2
2,080,765	+				-0.1
2,080,765	+				-0.3
2,080,765	+				+2.9
2,080,773	-				-1.6
2,080,828	-				-0.2
2,080,845	-		HP15_1964	0.11	+0.7
2,080,965	+		HP15_1964	0.20	+0.3
2,081,036	+		HP15_1964	0.25	+2.2
2,081,053	+		HP15_1964	0.26	-0.7
2,081,076	-		HP15_1964	0.28	-0.2
2,081,076	-		HP15_1964	0.28	+2.1
2,081,076	-		HP15_1964	0.28	-0.8
2,081,090	+		HP15_1964	0.29	+2.4
2,081,129	+		HP15_1964	0.32	+1.4
2,081,165	-		HP15_1964	0.35	-0.8
2,081,245	+		HP15_1964	0.41	-1.3
2,081,245	+		HP15_1964	0.41	-0.7
2,081,253	-		HP15_1964	0.41	+1.2
2,081,451	-		HP15_1964	0.56	+0.2
2,081,538	+		HP15_1964	0.63	+2.2
2,081,544	+		HP15_1964	0.63	-0.5
2,081,546	-		HP15_1964	0.63	-0.0
2,081,546	-		HP15_1964	0.63	+1.2
2,081,546	-		HP15_1964	0.63	-0.4
2,081,546	-		HP15_1964	0.63	+1.5
2,081,546	-		HP15_1964	0.63	+2.1
2,081,557	+		HP15_1964	0.64	+1.6
2,081,599	-		HP15_1964	0.67	+2.0
2,081,703	+		HP15_1964	0.75	-0.7
2,081,799	+		HP15_1964	0.83	-1.1
2,081,804	+		HP15_1964	0.83	-1.5
2,081,812	+		HP15_1964	0.84	+2.5
2,081,841	+		HP15_1964	0.86	+0.1
2,081,854	-		HP15_1964	0.87	+2.3
2,081,900	+				-1.1
2,082,164	-				+1.4
2,082,315	+				+0.1
2,082,315	+				-0.8
2,082,438	-				-0.3
2,082,561	+		HP15_1965	0.11	+1.2
2,082,569	-		HP15_1965	0.12	+1.4
2,082,629	-		HP15_1965	0.15	+1.5
2,082,742	+		HP15_1965	0.23	-0.4
2,082,936	-		HP15_1965	0.35	+0.5