Strain Fitness in Marinobacter adhaerens HP15 around HP15_1889

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
1,992,470	+				-0.5
1,992,498	+				-0.8
1,992,501	-				+1.9
1,992,571	-				+0.5
1,992,626	+		HP15_1888	0.13	+2.0
1,992,649	-		HP15_1888	0.16	+0.9
1,992,710	+		HP15_1888	0.23	+1.7
1,992,710	+		HP15_1888	0.23	+1.4
1,992,716	-		HP15_1888	0.24	-1.7
1,992,717	-		HP15_1888	0.24	+0.6
1,992,761	+		HP15_1888	0.29	+0.9
1,992,805	-		HP15_1888	0.35	+0.1
1,992,864	+		HP15_1888	0.42	-0.0
1,992,897	+		HP15_1888	0.46	-0.8
1,992,905	-		HP15_1888	0.47	+1.7
1,992,943	+		HP15_1888	0.52	-0.2
1,992,981	-		HP15_1888	0.56	+0.1
1,993,054	+		HP15_1888	0.65	-0.4
1,993,139	+		HP15_1888	0.76	+1.1
1,993,173	-		HP15_1888	0.80	-0.3
1,993,191	+		HP15_1888	0.82	-1.9
1,993,418	-				-0.9
1,993,455	+		HP15_1889	0.13	-0.0
1,993,704	+		HP15_1889	0.39	+0.2
1,993,709	+		HP15_1889	0.39	-0.4
1,993,745	-		HP15_1889	0.43	+1.9
1,993,752	+		HP15_1889	0.44	+0.1
1,993,752	+		HP15_1889	0.44	+0.6
1,993,757	+		HP15_1889	0.44	+1.1
1,993,757	+		HP15_1889	0.44	-0.2
1,993,758	-		HP15_1889	0.45	-0.5
1,993,767	+		HP15_1889	0.45	+1.2
1,993,775	-		HP15_1889	0.46	-1.5
1,993,885	-		HP15_1889	0.58	+2.2
1,993,973	+		HP15_1889	0.67	-0.1
1,993,991	-		HP15_1889	0.69	-0.7
1,994,023	+		HP15_1889	0.72	+0.5
1,994,031	-		HP15_1889	0.73	+1.8
1,994,031	-		HP15_1889	0.73	-0.3
1,994,051	+		HP15_1889	0.75	+0.3
1,994,051	+		HP15_1889	0.75	-0.7
1,994,313	+				+0.3
1,994,321	-				-0.1
1,994,321	-				+3.3
1,994,804	-		HP15_1890	0.21	+0.2
1,994,876	-		HP15_1890	0.24	-0.9
1,995,059	+		HP15_1890	0.32	+1.5
1,995,157	+		HP15_1890	0.37	+1.8
1,995,267	+		HP15_1890	0.42	+1.4