Strain Fitness in Marinobacter adhaerens HP15 around HP15_1820
Experiment: monoculture; Experiment B, time point 5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 5 |
---|---|---|---|---|---|
remove | |||||
1,917,026 | + | HP15_1820 | 0.35 | -1.0 | |
1,917,027 | - | HP15_1820 | 0.35 | -5.1 | |
1,917,095 | + | HP15_1820 | 0.41 | -4.0 | |
1,917,147 | + | HP15_1820 | 0.45 | -4.9 | |
1,917,205 | + | HP15_1820 | 0.49 | -4.6 | |
1,917,213 | - | HP15_1820 | 0.50 | -1.8 | |
1,917,497 | + | HP15_1820 | 0.73 | -6.3 | |
1,917,604 | - | HP15_1820 | 0.82 | -4.5 | |
1,917,673 | - | HP15_1820 | 0.87 | -5.3 | |
1,917,680 | + | HP15_1820 | 0.88 | -5.7 | |
1,917,688 | - | HP15_1820 | 0.88 | -3.4 | |
1,917,735 | + | -3.1 |
Or see this region's nucleotide sequence