Strain Fitness in Marinobacter adhaerens HP15 around HP15_1540

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
1,623,905	-		HP15_1538	0.85	+1.0
1,623,986	+				+1.4
1,624,093	-				-0.7
1,624,584	-		HP15_1539	0.71	+2.5
1,624,699	+		HP15_1539	0.89	-1.3
1,624,701	-		HP15_1539	0.89	-0.7
1,624,804	+				+2.1
1,624,964	+				-1.4
1,624,972	-				+0.2
1,624,999	-				+1.8
1,625,148	+		HP15_1540	0.16	-0.4
1,625,253	+		HP15_1540	0.22	+0.8
1,625,394	-		HP15_1540	0.29	+0.2
1,625,489	+		HP15_1540	0.34	-0.3
1,625,627	-		HP15_1540	0.41	-1.6
1,625,892	+		HP15_1540	0.55	+2.1
1,626,121	+		HP15_1540	0.67	-0.4
1,626,140	+		HP15_1540	0.68	+1.2
1,626,146	+		HP15_1540	0.69	+1.8
1,626,146	+		HP15_1540	0.69	+1.5
1,626,337	+		HP15_1540	0.79	-0.5
1,626,345	-		HP15_1540	0.79	-0.3
1,626,345	-		HP15_1540	0.79	-0.8
1,626,345	-		HP15_1540	0.79	-1.7
1,626,384	+		HP15_1540	0.81	-0.3
1,626,417	-		HP15_1540	0.83	-0.7
1,626,533	-		HP15_1540	0.89	-1.2
1,626,646	+				-0.7
1,626,697	-				+0.2
1,626,707	-				+0.1
1,626,751	-				-0.2
1,626,858	+		HP15_1541	0.18	+0.2
1,626,900	-		HP15_1541	0.25	+0.4
1,627,230	+		HP15_1541	0.79	-1.5
1,627,247	+		HP15_1541	0.82	-0.7
1,627,483	-		HP15_1542	0.49	-2.8
1,627,499	+		HP15_1542	0.57	+1.8
1,627,665	+		HP15_1543	0.11	-0.5
1,627,684	-		HP15_1543	0.13	+3.2
1,627,685	-		HP15_1543	0.13	+1.8
1,627,740	-		HP15_1543	0.21	+0.3