Strain Fitness in Marinobacter adhaerens HP15 around HP15_462
Experiment: monoculture; Experiment B, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 4 |
---|---|---|---|---|---|
remove | |||||
467,084 | + | HP15_461 | 0.52 | -3.4 | |
467,448 | + | +0.2 | |||
467,456 | - | +0.9 | |||
467,572 | - | -2.9 | |||
467,590 | + | +0.8 | |||
467,598 | - | -1.0 | |||
467,992 | + | HP15_462 | 0.49 | -1.2 | |
468,038 | + | HP15_462 | 0.70 | -0.0 | |
468,069 | + | HP15_462 | 0.84 | -0.8 | |
468,139 | + | +1.2 | |||
468,245 | + | -0.8 | |||
468,328 | + | -2.8 | |||
468,331 | - | -1.7 | |||
468,336 | - | -1.6 | |||
468,523 | + | HP15_463 | 0.17 | -1.3 | |
468,541 | - | HP15_463 | 0.18 | -0.4 | |
468,946 | - | HP15_463 | 0.36 | +1.4 | |
468,955 | + | HP15_463 | 0.36 | -1.1 | |
469,037 | - | HP15_463 | 0.40 | -0.6 | |
469,094 | + | HP15_463 | 0.42 | -2.1 |
Or see this region's nucleotide sequence