Strain Fitness in Marinobacter adhaerens HP15 around HP15_4082

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
4,313,825	-				+0.2
4,314,223	+				-0.4
4,314,246	-				-0.3
4,314,249	+				-1.0
4,314,271	-		HP15_4081	0.17	-0.5
4,314,429	+				+1.2
4,314,437	-				-0.5
4,314,444	-				-0.2
4,314,492	-				-2.0
4,314,521	+				-0.6
4,314,528	+				+0.4
4,314,528	+				+0.2
4,314,529	-				+1.6
4,314,536	-				-0.7
4,314,568	+				+0.0
4,314,569	+				+1.4
4,314,581	-				-0.3
4,314,652	+				+0.5
4,314,660	-				+0.1
4,314,660	-				-0.1
4,314,660	-				-1.9
4,314,694	-				+0.7
4,314,696	+				+0.1
4,314,729	-				-0.1
4,314,784	-				+0.2
4,314,785	-				-1.4
4,314,789	+				-0.8
4,314,789	+				-1.0
4,314,789	+				-1.5
4,314,789	+				+0.5
4,314,797	-				+0.1
4,314,797	-				-0.4
4,314,797	-				-0.3
4,314,905	+		HP15_4082	0.15	+0.4
4,314,913	-		HP15_4082	0.16	+0.5
4,314,998	+		HP15_4082	0.27	-0.7
4,315,003	+		HP15_4082	0.27	-0.8
4,315,003	+		HP15_4082	0.27	-0.1
4,315,011	-		HP15_4082	0.28	+0.9
4,315,011	-		HP15_4082	0.28	+0.9
4,315,011	-		HP15_4082	0.28	-0.9
4,315,131	-		HP15_4082	0.44	-0.7
4,315,155	+		HP15_4082	0.47	+0.1
4,315,192	+		HP15_4082	0.52	-1.9
4,315,233	-		HP15_4082	0.57	-0.0
4,315,308	-		HP15_4082	0.67	-0.6
4,315,320	-		HP15_4082	0.68	-0.4
4,315,348	+		HP15_4082	0.72	+2.5
4,315,356	-		HP15_4082	0.73	-1.7
4,315,401	+		HP15_4082	0.79	+0.9
4,315,452	+		HP15_4082	0.85	-1.3
4,315,465	-		HP15_4082	0.87	-0.5
4,315,489	-		HP15_4082	0.90	+0.6
4,315,496	-				-0.4
4,315,506	-				-0.7
4,315,507	+				-1.4
4,315,544	+				-0.5
4,315,544	+				-1.2
4,315,544	+				-0.7
4,315,544	+				-0.0
4,315,552	-				-0.3
4,315,552	-				-0.1
4,315,552	-				+0.2
4,315,552	-				+0.7
4,315,557	-				+0.3
4,315,614	-				-0.6
4,315,648	+				-0.7
4,315,690	-				-0.3
4,315,784	+				+0.5
4,315,787	-		HP15_4083	0.10	-1.6
4,315,823	-		HP15_4083	0.13	+0.4
4,315,838	+		HP15_4083	0.14	+0.4
4,315,856	-		HP15_4083	0.15	+1.2
4,315,892	+		HP15_4083	0.18	+0.1
4,316,016	+		HP15_4083	0.26	+0.4
4,316,024	-		HP15_4083	0.27	+0.3
4,316,033	+		HP15_4083	0.28	-0.6
4,316,041	-		HP15_4083	0.28	-0.3
4,316,105	+		HP15_4083	0.33	+1.5
4,316,129	-		HP15_4083	0.35	-0.5
4,316,198	+		HP15_4083	0.39	-0.7
4,316,237	-		HP15_4083	0.42	-0.0
4,316,312	-		HP15_4083	0.48	-1.1
4,316,316	+		HP15_4083	0.48	+1.3
4,316,333	+		HP15_4083	0.49	-1.1
4,316,341	-		HP15_4083	0.50	-1.6
4,316,514	+		HP15_4083	0.62	-2.8
4,316,522	-		HP15_4083	0.63	+1.1
4,316,522	-		HP15_4083	0.63	-1.0
4,316,538	+		HP15_4083	0.64	-0.6