Strain Fitness in Marinobacter adhaerens HP15 around HP15_3918

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
4,146,936	+		HP15_3916	0.85	-0.6
4,146,944	-		HP15_3916	0.85	+0.0
4,147,033	+				+1.9
4,147,077	+				+0.3
4,147,223	+				-0.5
4,147,268	+				-0.9
4,147,354	+		HP15_3917	0.20	-0.7
4,147,359	+		HP15_3917	0.21	-0.4
4,147,367	-		HP15_3917	0.22	-0.4
4,147,378	+		HP15_3917	0.24	+0.1
4,147,425	-		HP15_3917	0.32	+1.1
4,147,435	-		HP15_3917	0.34	+0.5
4,147,538	-		HP15_3917	0.52	+1.5
4,147,554	+		HP15_3917	0.55	-0.9
4,147,554	+		HP15_3917	0.55	-0.2
4,147,562	-		HP15_3917	0.56	-0.2
4,147,562	-		HP15_3917	0.56	-0.4
4,147,580	+		HP15_3917	0.59	-0.2
4,147,680	-		HP15_3917	0.77	-0.3
4,147,743	+		HP15_3917	0.88	-0.3
4,147,743	+		HP15_3917	0.88	-0.4
4,147,743	+		HP15_3917	0.88	-0.9
4,147,743	+		HP15_3917	0.88	-1.0
4,147,757	+				+0.1
4,147,792	+				+0.5
4,147,830	+				-0.8
4,147,838	-				-0.8
4,147,892	+				-0.5
4,148,085	-		HP15_3918	0.11	-1.4
4,148,085	-		HP15_3918	0.11	-1.0
4,148,218	-		HP15_3918	0.22	+0.7
4,148,321	+		HP15_3918	0.29	-1.3
4,148,332	+		HP15_3918	0.30	-1.7
4,148,337	+		HP15_3918	0.31	-1.3
4,148,348	-		HP15_3918	0.32	+1.3
4,148,532	+		HP15_3918	0.46	-1.5
4,148,540	-		HP15_3918	0.46	+1.3
4,148,622	-		HP15_3918	0.52	-0.1
4,148,655	+		HP15_3918	0.55	-1.5
4,148,824	+		HP15_3918	0.68	+0.8
4,148,832	-		HP15_3918	0.68	+0.0
4,148,917	+		HP15_3918	0.75	-0.5
4,148,941	-		HP15_3918	0.77	-0.2
4,148,941	-		HP15_3918	0.77	+1.1
4,149,006	+		HP15_3918	0.82	+0.8
4,149,006	+		HP15_3918	0.82	-0.5
4,149,006	+		HP15_3918	0.82	-0.2
4,149,021	+		HP15_3918	0.83	-0.5
4,149,029	-		HP15_3918	0.83	+0.2
4,149,050	+		HP15_3918	0.85	-1.8
4,149,058	-		HP15_3918	0.86	-0.4
4,149,073	-		HP15_3918	0.87	+0.0
4,149,073	-		HP15_3918	0.87	+0.5
4,149,073	-		HP15_3918	0.87	-0.6
4,149,083	-		HP15_3918	0.88	-1.1
4,149,225	+				+0.8
4,149,225	+				-0.3
4,149,263	-				-0.2
4,149,312	+		HP15_3919	0.13	-0.6
4,149,381	+		HP15_3919	0.26	+0.9
4,149,414	-		HP15_3919	0.33	+1.5
4,149,506	+		HP15_3919	0.50	+0.2
4,149,506	+		HP15_3919	0.50	+0.7
4,149,514	-		HP15_3919	0.52	-0.6
4,149,514	-		HP15_3919	0.52	-0.5
4,149,514	-		HP15_3919	0.52	+0.3
4,149,514	-		HP15_3919	0.52	-0.5
4,149,514	-		HP15_3919	0.52	-0.5
4,149,514	-		HP15_3919	0.52	-0.6
4,149,543	-		HP15_3919	0.57	+0.8
4,149,566	+		HP15_3919	0.62	+0.2
4,149,639	+		HP15_3919	0.76	-0.2
4,149,646	-		HP15_3919	0.77	+0.8
4,149,686	-		HP15_3919	0.85	+0.2
4,149,718	-				-0.7
4,149,718	-				-0.1
4,149,718	-				-0.4
4,149,726	-				+0.1
4,149,759	-				+1.4
4,149,759	-				-0.7
4,149,866	-				-0.0
4,149,866	-				+0.0
4,149,874	+				+1.9
4,149,877	-				+0.2
4,149,882	-				-1.6
4,149,990	+		HP15_3921	0.11	-1.2
4,150,012	+		HP15_3921	0.13	-0.3
4,150,012	+		HP15_3921	0.13	-1.1
4,150,020	-		HP15_3921	0.14	-0.2
4,150,050	-		HP15_3921	0.17	+0.2
4,150,060	-		HP15_3921	0.18	+0.3
4,150,064	+		HP15_3921	0.18	+0.7
4,150,149	+		HP15_3921	0.26	+0.6
4,150,149	+		HP15_3921	0.26	+2.4
4,150,157	-		HP15_3921	0.27	+0.8
4,150,163	+		HP15_3921	0.27	-1.8
4,150,164	-		HP15_3921	0.28	-2.5
4,150,165	-		HP15_3921	0.28	+0.1
4,150,194	+		HP15_3921	0.30	+1.2
4,150,235	+		HP15_3921	0.34	+0.3
4,150,243	-		HP15_3921	0.35	-0.6