Strain Fitness in Marinobacter adhaerens HP15 around HP15_3247

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,400,124	-		HP15_3246	0.16	-0.6
3,400,161	-		HP15_3246	0.24	-0.0
3,400,163	+		HP15_3246	0.25	-0.7
3,400,198	+		HP15_3246	0.32	+0.5
3,400,287	+		HP15_3246	0.52	-0.5
3,400,288	+		HP15_3246	0.52	-0.4
3,400,288	+		HP15_3246	0.52	-0.3
3,400,300	+		HP15_3246	0.55	+1.7
3,400,308	-		HP15_3246	0.56	-0.1
3,400,369	+		HP15_3246	0.70	-0.7
3,400,454	-		HP15_3246	0.88	-1.7
3,400,456	+		HP15_3246	0.89	-0.5
3,400,456	+		HP15_3246	0.89	-0.6
3,400,470	-				+0.4
3,400,623	-				+0.4
3,400,661	-				+0.7
3,400,663	+				-0.3
3,400,709	-				+0.7
3,400,898	+		HP15_3247	0.23	-1.3
3,400,906	-		HP15_3247	0.23	-0.4
3,400,911	-		HP15_3247	0.24	+0.7
3,400,921	-		HP15_3247	0.25	-0.5
3,400,935	+		HP15_3247	0.26	+0.0
3,401,114	-		HP15_3247	0.43	+1.2
3,401,114	-		HP15_3247	0.43	-0.8
3,401,243	+		HP15_3247	0.55	-2.0
3,401,243	+		HP15_3247	0.55	+0.5
3,401,251	-		HP15_3247	0.56	-0.7
3,401,253	+		HP15_3247	0.56	+0.2
3,401,277	-		HP15_3247	0.58	-0.7
3,401,293	+		HP15_3247	0.59	-1.9
3,401,293	+		HP15_3247	0.59	-0.1
3,401,354	+		HP15_3247	0.65	-0.7
3,401,510	+		HP15_3247	0.80	-0.8
3,401,518	-		HP15_3247	0.80	-0.7
3,401,605	-		HP15_3247	0.88	-1.1
3,401,656	+				-0.1
3,401,702	+				+0.2
3,401,722	-				-0.3
3,401,745	-				-0.6
3,401,783	-				+0.0
3,401,882	-				-0.7
3,402,107	+		HP15_3248	0.50	+0.5
3,402,214	-		HP15_3248	0.70	-0.6
3,402,268	+		HP15_3248	0.80	+0.2
3,402,313	-		HP15_3248	0.88	-1.6
3,402,340	-				-1.2
3,402,341	+				-0.8
3,402,341	+				-0.6
3,402,349	-				-0.2
3,402,442	-				-1.7
3,402,668	+		HP15_3249	0.23	+0.7
3,402,678	+		HP15_3249	0.23	-1.5
3,402,702	+		HP15_3249	0.25	-1.5