Strain Fitness in Marinobacter adhaerens HP15 around HP15_2204
Experiment: monoculture; Experiment B, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 4 |
---|---|---|---|---|---|
remove | |||||
2,323,027 | + | -0.2 | |||
2,323,087 | - | -1.1 | |||
2,323,094 | - | +0.3 | |||
2,323,174 | - | HP15_2204 | 0.18 | +0.5 | |
2,323,536 | + | HP15_2204 | 0.66 | -0.1 | |
2,323,613 | - | HP15_2204 | 0.77 | +1.6 | |
2,323,613 | - | HP15_2204 | 0.77 | +1.0 | |
2,323,791 | + | -0.0 | |||
2,323,879 | + | +0.1 | |||
2,324,019 | + | -0.2 | |||
2,324,027 | - | +1.5 | |||
2,324,044 | + | +0.1 | |||
2,324,397 | - | HP15_2205 | 0.33 | +1.2 | |
2,324,621 | + | HP15_2205 | 0.49 | -1.1 | |
2,324,636 | + | HP15_2205 | 0.50 | +0.6 | |
2,324,636 | + | HP15_2205 | 0.50 | +0.7 | |
2,324,644 | - | HP15_2205 | 0.50 | +0.6 | |
2,324,706 | - | HP15_2205 | 0.54 | +0.0 | |
2,324,750 | - | HP15_2205 | 0.58 | +1.7 | |
2,324,751 | - | HP15_2205 | 0.58 | -0.3 |
Or see this region's nucleotide sequence