Strain Fitness in Marinobacter adhaerens HP15 around HP15_3982

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
4,212,694	-		HP15_3980	0.86	+2.1
4,212,694	-		HP15_3980	0.86	-1.0
4,212,709	-		HP15_3980	0.86	-2.2
4,212,780	-		HP15_3980	0.90	-2.1
4,212,890	+				-0.5
4,213,203	+				-0.2
4,213,211	-				+1.4
4,213,211	-				-0.8
4,213,301	+		HP15_3981	0.26	+0.0
4,213,379	-		HP15_3981	0.40	+0.1
4,213,518	-		HP15_3981	0.66	-1.8
4,213,545	+		HP15_3981	0.72	-2.4
4,213,564	-		HP15_3981	0.75	-2.8
4,213,660	-				-1.3
4,213,695	+				+0.4
4,213,778	-				+1.2
4,213,859	+		HP15_3982	0.13	-1.2
4,213,908	+		HP15_3982	0.17	-0.9
4,213,952	-		HP15_3982	0.20	-0.5
4,214,000	-		HP15_3982	0.24	+0.1
4,214,015	+		HP15_3982	0.25	-0.5
4,214,083	+		HP15_3982	0.31	+0.2
4,214,093	+		HP15_3982	0.32	-0.6
4,214,124	+		HP15_3982	0.34	-0.1
4,214,127	-		HP15_3982	0.34	+0.5
4,214,132	-		HP15_3982	0.35	+0.5
4,214,155	+		HP15_3982	0.36	-0.5
4,214,155	+		HP15_3982	0.36	-1.8
4,214,163	-		HP15_3982	0.37	-3.2
4,214,163	-		HP15_3982	0.37	+0.9
4,214,226	-		HP15_3982	0.42	-1.0
4,214,301	+		HP15_3982	0.48	-0.8
4,214,301	+		HP15_3982	0.48	-1.3
4,214,309	-		HP15_3982	0.49	-0.6
4,214,345	+		HP15_3982	0.51	-0.5
4,214,353	-		HP15_3982	0.52	-1.8
4,214,496	+		HP15_3982	0.63	+0.8
4,214,525	+		HP15_3982	0.65	-0.9
4,214,533	-		HP15_3982	0.66	+0.1
4,214,533	-		HP15_3982	0.66	-1.2
4,214,533	-		HP15_3982	0.66	+0.2
4,214,552	+		HP15_3982	0.68	+1.3
4,214,591	+		HP15_3982	0.71	-0.3
4,214,599	-		HP15_3982	0.71	+0.2
4,214,640	-		HP15_3982	0.75	-0.1
4,214,692	-		HP15_3982	0.79	-0.7
4,214,729	+		HP15_3982	0.82	-0.2
4,214,770	-		HP15_3982	0.85	+0.3
4,214,770	-		HP15_3982	0.85	+1.6
4,214,785	-		HP15_3982	0.86	-0.0
4,214,834	+		HP15_3982	0.90	-0.9
4,215,015	-				+1.5
4,215,074	+				+0.1
4,215,089	+				+0.3
4,215,089	+				-1.2
4,215,176	+		HP15_3983	0.76	-0.7
4,215,184	+		HP15_3983	0.82	-0.4
4,215,228	+				+0.3
4,215,228	+				-0.3
4,215,228	+				-1.3
4,215,229	-				+0.4
4,215,236	-				+0.1
4,215,236	-				+0.4
4,215,236	-				+1.8
4,215,236	-				+0.8
4,215,273	-				-1.3
4,215,366	-				-0.8
4,215,469	-				-0.2
4,215,519	-		HP15_3984	0.12	+0.5
4,215,528	-		HP15_3984	0.12	-0.1
4,215,612	-		HP15_3984	0.17	-0.3
4,215,644	-		HP15_3984	0.19	+1.1
4,215,676	+		HP15_3984	0.20	+0.3
4,215,713	+		HP15_3984	0.22	-0.2
4,215,905	-		HP15_3984	0.33	+0.3
4,215,919	+		HP15_3984	0.34	+0.8
4,215,919	+		HP15_3984	0.34	+0.8
4,215,923	-		HP15_3984	0.34	-1.2