Strain Fitness in Marinobacter adhaerens HP15 around HP15_3936

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
4,164,016	-		HP15_3935	0.49	+0.2
4,164,032	+		HP15_3935	0.50	+1.1
4,164,041	-		HP15_3935	0.51	+0.5
4,164,326	+		HP15_3935	0.67	-0.2
4,164,334	-		HP15_3935	0.67	+1.5
4,164,389	-		HP15_3935	0.70	-0.8
4,164,413	-		HP15_3935	0.72	+0.2
4,164,642	+		HP15_3935	0.84	+0.5
4,164,684	-		HP15_3935	0.87	+0.5
4,164,689	-		HP15_3935	0.87	+0.5
4,164,759	+				-2.5
4,164,778	+				+1.1
4,164,786	-				-2.9
4,164,887	-				+1.6
4,164,892	-				-0.5
4,165,064	+				+0.9
4,165,175	-		HP15_3936	0.15	+0.2
4,165,231	+		HP15_3936	0.20	+1.0
4,165,358	+		HP15_3936	0.31	+0.4
4,165,366	-		HP15_3936	0.31	-0.4
4,165,366	-		HP15_3936	0.31	+0.0
4,165,396	+		HP15_3936	0.34	+1.8
4,165,468	+		HP15_3936	0.40	-2.2
4,165,622	-		HP15_3936	0.53	-1.5
4,165,763	+		HP15_3936	0.65	-0.1
4,165,771	-		HP15_3936	0.66	-0.4
4,165,771	-		HP15_3936	0.66	-1.8
4,165,911	-		HP15_3936	0.78	+0.5
4,165,973	+		HP15_3936	0.83	+0.2
4,166,015	-		HP15_3936	0.87	-0.1
4,166,121	-				-0.3
4,166,152	-				-0.2
4,166,228	-				+1.2
4,166,325	+				-2.7
4,166,325	+				+1.3
4,166,330	+				-0.7
4,166,333	-				+0.0
4,166,333	-				-0.5
4,166,333	-				+0.3
4,166,370	-				-0.3
4,166,422	+				+1.0
4,166,477	+				-1.8
4,166,487	+		HP15_3937	0.10	+1.6
4,166,598	+		HP15_3937	0.18	+1.2
4,166,598	+		HP15_3937	0.18	-1.4
4,166,606	-		HP15_3937	0.19	+1.4
4,166,606	-		HP15_3937	0.19	+0.7
4,166,637	-		HP15_3937	0.21	+0.7
4,166,680	+		HP15_3937	0.24	-0.9
4,166,680	+		HP15_3937	0.24	-0.2
4,166,711	-		HP15_3937	0.27	-1.8
4,166,716	-		HP15_3937	0.27	-0.4
4,166,716	-		HP15_3937	0.27	-0.3
4,166,719	+		HP15_3937	0.27	+0.5
4,166,729	+		HP15_3937	0.28	-0.1
4,166,737	-		HP15_3937	0.28	+0.1
4,166,794	+		HP15_3937	0.33	-0.9
4,166,861	-		HP15_3937	0.38	+1.1
4,166,861	-		HP15_3937	0.38	-0.8
4,166,883	-		HP15_3937	0.39	+2.4
4,167,038	+		HP15_3937	0.50	+1.0
4,167,046	-		HP15_3937	0.51	-0.7
4,167,082	+		HP15_3937	0.54	+0.6
4,167,148	+		HP15_3937	0.59	-0.4
4,167,156	-		HP15_3937	0.59	+0.0