Strain Fitness in Marinobacter adhaerens HP15 around HP15_3841

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
4,065,863	-		HP15_3840	0.27	+0.9
4,065,922	+		HP15_3840	0.34	+1.5
4,065,942	+		HP15_3840	0.36	+1.3
4,065,950	-		HP15_3840	0.37	-0.9
4,065,955	+		HP15_3840	0.37	+0.7
4,065,980	+		HP15_3840	0.40	-0.9
4,066,105	-		HP15_3840	0.55	-0.4
4,066,147	-		HP15_3840	0.60	+0.8
4,066,188	+		HP15_3840	0.65	-0.6
4,066,198	-		HP15_3840	0.66	+1.0
4,066,221	+		HP15_3840	0.69	+0.5
4,066,242	-		HP15_3840	0.71	-0.1
4,066,297	+		HP15_3840	0.78	+0.1
4,066,305	-		HP15_3840	0.79	-1.3
4,066,382	-		HP15_3840	0.88	-0.2
4,066,420	-				+0.2
4,066,435	+				+1.5
4,066,448	-				+1.3
4,066,453	-				+1.3
4,066,486	+				+1.0
4,066,486	+				+1.7
4,066,494	-				+0.7
4,066,494	-				+1.5
4,066,494	-				+0.6
4,066,561	-				-0.7
4,066,595	+				-0.4
4,066,603	-				-1.3
4,066,603	-				-0.2
4,066,603	-				-0.3
4,066,704	-				-0.4
4,066,861	+		HP15_3841	0.13	-1.5
4,066,899	+		HP15_3841	0.15	-1.8
4,066,914	+		HP15_3841	0.16	-0.2
4,066,992	+		HP15_3841	0.21	-1.2
4,067,077	+		HP15_3841	0.26	-0.8
4,067,133	-		HP15_3841	0.29	-0.8
4,067,151	+		HP15_3841	0.30	+1.5
4,067,161	+		HP15_3841	0.31	-0.4
4,067,161	+		HP15_3841	0.31	-1.8
4,067,333	+		HP15_3841	0.41	+0.2
4,067,343	+		HP15_3841	0.41	-0.2
4,067,356	-		HP15_3841	0.42	-1.4
4,067,364	+		HP15_3841	0.43	-1.6
4,067,400	-		HP15_3841	0.45	-0.9
4,067,516	+		HP15_3841	0.51	-0.7
4,067,516	+		HP15_3841	0.51	+0.5
4,067,524	-		HP15_3841	0.52	-1.6
4,067,555	+		HP15_3841	0.54	-2.0
4,067,615	-		HP15_3841	0.57	-1.3
4,067,869	-		HP15_3841	0.72	-1.2
4,067,869	-		HP15_3841	0.72	-1.7
4,067,941	+		HP15_3841	0.76	-0.4
4,067,959	-		HP15_3841	0.77	-1.0
4,067,959	-		HP15_3841	0.77	-1.2
4,068,005	-		HP15_3841	0.80	-1.0
4,068,017	+		HP15_3841	0.81	-1.4
4,068,018	+		HP15_3841	0.81	-0.3
4,068,112	-		HP15_3841	0.86	-1.0
4,068,140	-		HP15_3841	0.88	-0.1
4,068,257	-				+0.8
4,068,520	+		HP15_3842	0.15	-0.8
4,068,528	-		HP15_3842	0.16	-0.8
4,068,608	+		HP15_3842	0.23	+1.6
4,068,632	+		HP15_3842	0.25	+0.3
4,068,667	+		HP15_3842	0.28	+0.7
4,068,670	+		HP15_3842	0.28	-0.3
4,068,675	-		HP15_3842	0.29	+0.1
4,068,675	-		HP15_3842	0.29	+1.9
4,068,675	-		HP15_3842	0.29	-0.3
4,068,689	+		HP15_3842	0.30	+0.6
4,068,697	-		HP15_3842	0.31	+1.3
4,068,745	+		HP15_3842	0.35	+0.6
4,068,779	+		HP15_3842	0.38	-0.7
4,068,837	+		HP15_3842	0.43	-0.3
4,068,856	-		HP15_3842	0.45	-0.5
4,068,884	-		HP15_3842	0.47	+0.2
4,068,970	+		HP15_3842	0.55	+1.2
4,068,970	+		HP15_3842	0.55	-2.7
4,068,983	-		HP15_3842	0.56	+0.8
4,069,056	-		HP15_3842	0.63	+0.1
4,069,056	-		HP15_3842	0.63	+1.8
4,069,106	+		HP15_3842	0.67	-0.6
4,069,117	+		HP15_3842	0.68	+0.5
4,069,209	-		HP15_3842	0.77	+0.0
4,069,220	-		HP15_3842	0.78	-0.2