Strain Fitness in Marinobacter adhaerens HP15 around HP15_3653

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,847,048	-				+0.2
3,847,160	-		HP15_3652	0.18	-0.6
3,847,322	-		HP15_3652	0.33	-1.5
3,847,371	+		HP15_3652	0.38	-0.4
3,847,389	+		HP15_3652	0.40	-0.0
3,847,397	-		HP15_3652	0.41	+0.8
3,847,443	-		HP15_3652	0.45	+0.4
3,847,443	-		HP15_3652	0.45	-0.1
3,847,480	+		HP15_3652	0.49	+0.8
3,847,510	-		HP15_3652	0.51	-1.6
3,847,512	-		HP15_3652	0.52	-0.9
3,847,562	+		HP15_3652	0.56	+0.5
3,847,582	+		HP15_3652	0.58	-1.5
3,847,590	-		HP15_3652	0.59	-0.6
3,847,590	-		HP15_3652	0.59	-1.6
3,847,592	-		HP15_3652	0.59	-0.3
3,847,594	+		HP15_3652	0.59	-0.2
3,847,616	-		HP15_3652	0.62	-1.2
3,847,636	+		HP15_3652	0.64	+0.2
3,847,659	-		HP15_3652	0.66	-1.2
3,847,659	-		HP15_3652	0.66	-0.5
3,847,659	-		HP15_3652	0.66	-0.3
3,847,659	-		HP15_3652	0.66	+1.3
3,847,659	-		HP15_3652	0.66	+0.8
3,847,659	-		HP15_3652	0.66	-0.2
3,847,664	-		HP15_3652	0.66	-1.3
3,847,674	-		HP15_3652	0.67	-1.0
3,847,778	+		HP15_3652	0.77	+0.2
3,847,834	-		HP15_3652	0.82	+0.4
3,847,877	-		HP15_3652	0.87	+0.3
3,847,942	+				-0.4
3,847,955	-				-0.2
3,848,022	+				-0.3
3,848,045	+				+0.1
3,848,148	+		HP15_3653	0.11	-0.1
3,848,172	-		HP15_3653	0.13	+1.7
3,848,186	+		HP15_3653	0.15	+0.9
3,848,194	-		HP15_3653	0.15	-0.2
3,848,205	+		HP15_3653	0.17	+0.4
3,848,212	+		HP15_3653	0.17	-1.6
3,848,220	-		HP15_3653	0.18	+1.1
3,848,228	-		HP15_3653	0.19	-0.5
3,848,228	-		HP15_3653	0.19	-0.9
3,848,305	+		HP15_3653	0.26	+0.1
3,848,315	-		HP15_3653	0.27	-1.1
3,848,331	+		HP15_3653	0.29	+1.8
3,848,455	+		HP15_3653	0.40	+1.7
3,848,463	-		HP15_3653	0.41	-0.4
3,848,501	+		HP15_3653	0.45	+1.4
3,848,508	-		HP15_3653	0.45	+0.3
3,848,531	+		HP15_3653	0.48	-0.6
3,848,608	+		HP15_3653	0.55	-0.2
3,848,608	-		HP15_3653	0.55	-0.0
3,848,718	+		HP15_3653	0.66	+1.2
3,848,786	+		HP15_3653	0.72	+0.4
3,848,792	-		HP15_3653	0.73	+1.8
3,848,794	-		HP15_3653	0.73	-0.3
3,848,913	+		HP15_3653	0.84	+1.7
3,848,948	+		HP15_3653	0.87	-0.1
3,848,980	+				-0.5
3,848,980	+				-0.3
3,848,988	-				+0.1
3,848,988	-				+0.0
3,848,988	-				-0.9
3,848,988	-				+0.5
3,849,022	-				-0.5
3,849,072	+				-0.5
3,849,088	-				+0.4
3,849,165	+		HP15_3654	0.10	+0.9
3,849,207	+		HP15_3654	0.17	+1.1
3,849,207	+		HP15_3654	0.17	-0.3
3,849,215	-		HP15_3654	0.18	-1.0
3,849,215	-		HP15_3654	0.18	+1.1
3,849,260	+		HP15_3654	0.24	+0.2
3,849,289	+		HP15_3654	0.28	+0.2
3,849,291	+		HP15_3654	0.29	+0.2
3,849,326	+		HP15_3654	0.34	-1.3
3,849,331	+		HP15_3654	0.34	+0.9
3,849,331	+		HP15_3654	0.34	-0.9
3,849,546	+		HP15_3654	0.66	-1.3
3,849,646	+		HP15_3654	0.80	+1.1
3,849,661	+		HP15_3654	0.82	+0.0
3,849,669	-		HP15_3654	0.83	-0.2
3,849,741	+				-3.0
3,849,798	-				+1.3
3,849,933	+		HP15_3655	0.19	+0.4
3,849,941	-		HP15_3655	0.20	+1.7
3,849,945	-		HP15_3655	0.21	-0.6
3,850,066	+		HP15_3655	0.37	+1.3