Strain Fitness in Marinobacter adhaerens HP15 around HP15_3373

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,538,960	+				+1.1
3,538,968	-				+1.1
3,538,972	+				-0.1
3,539,027	+				-0.5
3,539,027	+				-1.1
3,539,035	-				-0.4
3,539,035	-				+1.2
3,539,074	+				+1.2
3,539,119	+		HP15_3372	0.15	+0.1
3,539,127	-		HP15_3372	0.16	-0.4
3,539,134	-		HP15_3372	0.17	+0.1
3,539,317	+		HP15_3372	0.43	-0.3
3,539,327	+		HP15_3372	0.45	-0.2
3,539,383	+		HP15_3372	0.53	-0.9
3,539,438	+		HP15_3372	0.61	+0.9
3,539,580	+		HP15_3372	0.81	-2.7
3,539,674	-				+0.2
3,539,674	-				+0.8
3,539,692	+				+0.8
3,539,692	+				-0.4
3,539,692	+				+0.2
3,539,918	-		HP15_3373	0.17	+2.2
3,540,146	+				-0.9
3,540,197	+				+0.8
3,540,375	+		HP15_3374	0.12	+0.4
3,540,402	-		HP15_3374	0.19	-0.7
3,540,575	+		HP15_3374	0.65	+0.4
3,540,703	+				-1.4
3,540,708	+				+0.2
3,540,867	+				-0.1
3,540,885	-				-0.9
3,540,969	+				-0.9
3,540,969	+				-0.0
3,540,977	-		HP15_3375	0.10	+1.1