Strain Fitness in Marinobacter adhaerens HP15 around HP15_3239

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,391,401	+		HP15_3236	0.84	-1.9
3,391,452	-		HP15_3236	0.88	+0.7
3,391,493	-				+0.5
3,391,506	-				+0.1
3,391,523	-				+0.8
3,391,556	-				+1.2
3,391,557	-				-0.8
3,391,670	+		HP15_3237	0.12	+0.0
3,391,774	+		HP15_3237	0.42	-0.5
3,391,881	+		HP15_3237	0.72	-0.0
3,391,894	-		HP15_3237	0.76	-0.1
3,391,923	+		HP15_3237	0.84	-0.7
3,391,941	-		HP15_3237	0.89	-1.0
3,391,967	+				+0.5
3,391,987	-				+0.1
3,392,076	+		HP15_3238	0.22	+0.4
3,392,076	+		HP15_3238	0.22	+1.8
3,392,076	+		HP15_3238	0.22	+0.1
3,392,369	-				+0.3
3,392,409	-				-0.9
3,392,411	-				+0.1
3,392,435	+				+0.5
3,392,757	+		HP15_3239	0.19	-0.4
3,392,774	-		HP15_3239	0.20	+0.1
3,392,812	+		HP15_3239	0.22	-1.3
3,392,859	+		HP15_3239	0.24	-0.6
3,392,872	-		HP15_3239	0.25	-0.3
3,392,884	+		HP15_3239	0.25	-1.3
3,392,893	+		HP15_3239	0.26	+1.6
3,392,906	-		HP15_3239	0.27	+1.8
3,392,953	+		HP15_3239	0.29	-2.0
3,393,209	+		HP15_3239	0.42	-0.2
3,393,288	+		HP15_3239	0.46	+1.2
3,393,296	-		HP15_3239	0.47	+1.4
3,393,296	-		HP15_3239	0.47	+0.3
3,393,406	-		HP15_3239	0.52	+0.6
3,393,433	-		HP15_3239	0.54	-0.1
3,393,460	+		HP15_3239	0.55	+0.6
3,393,497	+		HP15_3239	0.57	+1.6
3,393,512	+		HP15_3239	0.58	+0.7
3,393,518	+		HP15_3239	0.58	-0.2
3,393,523	+		HP15_3239	0.58	-0.1
3,393,526	-		HP15_3239	0.58	-0.1
3,393,585	-		HP15_3239	0.61	+0.1
3,393,611	+		HP15_3239	0.63	+0.3
3,393,611	+		HP15_3239	0.63	+0.4
3,393,611	+		HP15_3239	0.63	-1.0
3,393,611	+		HP15_3239	0.63	+1.6
3,393,619	-		HP15_3239	0.63	-1.1
3,393,729	-		HP15_3239	0.69	+1.2
3,393,806	+		HP15_3239	0.73	+0.2
3,393,843	+		HP15_3239	0.75	-0.6
3,393,936	+		HP15_3239	0.79	+1.1
3,393,944	-		HP15_3239	0.80	-1.8
3,393,981	+		HP15_3239	0.82	+0.7
3,394,131	-		HP15_3239	0.89	+1.5
3,394,282	-				+0.2
3,394,340	-				-0.2
3,394,438	+				+0.4
3,394,477	+				-0.9
3,394,517	+				-1.7
3,394,567	+				+0.4
3,394,596	-		HP15_3240	0.11	-0.5
3,394,596	-		HP15_3240	0.11	-0.9
3,394,752	+		HP15_3240	0.20	+1.6
3,394,780	+		HP15_3240	0.22	+0.8
3,394,798	-		HP15_3240	0.23	-0.2
3,394,877	-		HP15_3240	0.27	-0.1
3,395,074	+		HP15_3240	0.39	-1.3
3,395,193	+		HP15_3240	0.46	+0.8
3,395,193	+		HP15_3240	0.46	+0.7
3,395,193	+		HP15_3240	0.46	+0.3