Strain Fitness in Marinobacter adhaerens HP15 around HP15_2300

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
2,420,896	+		HP15_2298	0.66	+0.5
2,421,098	+		HP15_2298	0.75	+0.4
2,421,200	+		HP15_2298	0.80	+1.3
2,421,241	+		HP15_2298	0.82	+1.6
2,421,249	-		HP15_2298	0.82	-0.1
2,421,249	-		HP15_2298	0.82	+0.0
2,421,260	-		HP15_2298	0.83	-1.0
2,421,318	-		HP15_2298	0.85	+0.7
2,421,342	+		HP15_2298	0.86	+0.9
2,421,456	-				+0.2
2,421,501	-				+1.1
2,421,505	+				+0.8
2,421,530	-				-3.0
2,421,633	+				-0.2
2,421,633	+				+1.2
2,421,641	-				-1.0
2,421,727	-		HP15_2299	0.18	+0.9
2,421,750	-		HP15_2299	0.33	+2.4
2,421,815	+		HP15_2299	0.76	+1.5
2,421,873	+				+3.6
2,422,041	-		HP15_2300	0.28	+1.6
2,422,102	+		HP15_2300	0.39	+0.2
2,422,110	-		HP15_2300	0.41	+2.3
2,422,143	+		HP15_2300	0.46	+1.5
2,422,312	+		HP15_2300	0.77	+1.8
2,422,315	-		HP15_2300	0.77	+1.8
2,422,357	+		HP15_2300	0.85	+2.6
2,422,396	+				+1.3
2,422,404	-				+1.3
2,422,545	-		HP15_2301	0.24	-1.0
2,422,565	+		HP15_2301	0.29	+1.7
2,422,565	+		HP15_2301	0.29	+0.1
2,422,628	+		HP15_2301	0.46	+0.3
2,422,628	+		HP15_2301	0.46	+0.7
2,422,628	+		HP15_2301	0.46	-0.5
2,422,636	-		HP15_2301	0.48	+0.7
2,422,636	-		HP15_2301	0.48	+1.8
2,422,636	-		HP15_2301	0.48	-1.3
2,422,987	+				-0.5
2,423,070	+				+0.3
2,423,070	+				+0.1
2,423,070	+				+0.8
2,423,078	-		HP15_2302	0.11	+0.2
2,423,078	-		HP15_2302	0.11	-0.3
2,423,078	-		HP15_2302	0.11	+1.2
2,423,093	-		HP15_2302	0.13	-2.7
2,423,119	-		HP15_2302	0.16	+0.4
2,423,231	+		HP15_2302	0.31	+0.5
2,423,346	+		HP15_2302	0.47	+1.0
2,423,346	+		HP15_2302	0.47	+1.0
2,423,346	+		HP15_2302	0.47	+0.8
2,423,354	-		HP15_2302	0.48	+0.8
2,423,370	+		HP15_2302	0.50	-2.4