Strain Fitness in Marinobacter adhaerens HP15 around HP15_2219

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
2,334,605	-				+0.5
2,334,625	+				-0.1
2,334,818	+		HP15_2218	0.19	+0.4
2,334,925	-		HP15_2218	0.37	-1.5
2,334,950	-		HP15_2218	0.41	-0.1
2,334,950	-		HP15_2218	0.41	-1.0
2,334,950	-		HP15_2218	0.41	-1.4
2,334,950	-		HP15_2218	0.41	-0.7
2,335,000	+		HP15_2218	0.49	-0.7
2,335,006	+		HP15_2218	0.50	-0.3
2,335,016	-		HP15_2218	0.52	-1.2
2,335,180	+		HP15_2218	0.78	-1.1
2,335,180	+		HP15_2218	0.78	-0.7
2,335,180	+		HP15_2218	0.78	-0.5
2,335,190	+		HP15_2218	0.80	-0.2
2,335,212	+		HP15_2218	0.84	+0.2
2,335,417	+				-0.3
2,335,425	+		HP15_2219	0.11	+1.1
2,335,450	-		HP15_2219	0.13	+0.4
2,335,462	+		HP15_2219	0.14	-0.0
2,335,480	-		HP15_2219	0.16	+0.1
2,335,525	-		HP15_2219	0.20	-0.3
2,335,573	+		HP15_2219	0.25	-1.6
2,335,594	-		HP15_2219	0.27	+0.7
2,335,686	-		HP15_2219	0.36	-1.5
2,335,722	+		HP15_2219	0.39	-3.0
2,335,722	+		HP15_2219	0.39	-0.7
2,335,783	-		HP15_2219	0.45	-1.0
2,335,798	-		HP15_2219	0.46	+0.1
2,335,833	-		HP15_2219	0.50	-0.7
2,335,930	+		HP15_2219	0.59	+0.0
2,336,018	+		HP15_2219	0.67	+1.4
2,336,023	+		HP15_2219	0.68	-0.4
2,336,106	+		HP15_2219	0.76	-1.2
2,336,114	-		HP15_2219	0.77	-0.1
2,336,150	-		HP15_2219	0.80	-0.2
2,336,191	-		HP15_2219	0.84	-0.0
2,336,193	+		HP15_2219	0.84	+0.0
2,336,193	+		HP15_2219	0.84	+0.9
2,336,201	-		HP15_2219	0.85	-1.9
2,336,201	-		HP15_2219	0.85	-0.2
2,336,396	+				-1.4
2,336,469	+		HP15_2220	0.11	+1.0
2,336,645	-		HP15_2220	0.38	-0.1
2,336,677	+		HP15_2220	0.43	-2.3
2,336,756	+		HP15_2220	0.55	-1.7
2,336,798	+		HP15_2220	0.62	-1.7
2,336,932	+		HP15_2220	0.82	+1.0
2,336,955	-		HP15_2220	0.86	-1.9
2,336,975	-		HP15_2220	0.89	-0.6
2,336,994	-				-0.7
2,337,011	-				-0.5
2,337,279	+		HP15_2221	0.22	+0.0
2,337,287	-		HP15_2221	0.23	+0.7
2,337,346	-		HP15_2221	0.29	-0.8
2,337,346	-		HP15_2221	0.29	+1.1