Strain Fitness in Marinobacter adhaerens HP15 around HP15_1528
Experiment: monoculture; Experiment B, time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 3 |
---|---|---|---|---|---|
remove | |||||
1,610,195 | + | HP15_1528 | 0.17 | -1.1 | |
1,610,203 | - | HP15_1528 | 0.18 | -1.2 | |
1,610,532 | - | HP15_1528 | 0.57 | +1.3 | |
1,610,564 | + | HP15_1528 | 0.61 | -0.1 | |
1,610,798 | + | HP15_1528 | 0.89 | +0.2 | |
1,610,808 | + | -1.9 | |||
1,610,946 | + | +0.9 | |||
1,611,074 | - | HP15_1529 | 0.23 | +1.0 | |
1,611,316 | + | HP15_1529 | 0.61 | +0.2 | |
1,611,366 | - | HP15_1529 | 0.68 | +0.4 | |
1,611,643 | + | +0.5 | |||
1,611,676 | - | -1.2 | |||
1,611,853 | + | HP15_1530 | 0.25 | +0.8 | |
1,611,853 | + | HP15_1530 | 0.25 | -1.2 |
Or see this region's nucleotide sequence