Strain Fitness in Marinobacter adhaerens HP15 around HP15_1360
Experiment: monoculture; Experiment B, time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 3 |
---|---|---|---|---|---|
remove | |||||
1,428,749 | + | -4.5 | |||
1,428,749 | + | -1.8 | |||
1,428,836 | - | HP15_1358 | 0.17 | -2.8 | |
1,429,023 | - | HP15_1358 | 0.44 | -2.0 | |
1,429,064 | + | HP15_1358 | 0.49 | -0.7 | |
1,429,181 | + | HP15_1358 | 0.66 | -1.9 | |
1,429,192 | + | HP15_1358 | 0.67 | -1.3 | |
1,429,192 | + | HP15_1358 | 0.67 | -2.5 | |
1,429,200 | - | HP15_1358 | 0.68 | -1.3 | |
1,429,200 | - | HP15_1358 | 0.68 | -2.7 | |
1,429,317 | + | HP15_1358 | 0.85 | -2.6 | |
1,429,334 | - | HP15_1358 | 0.87 | +2.9 | |
1,429,334 | - | HP15_1358 | 0.87 | -2.6 | |
1,429,409 | - | -2.4 |
Or see this region's nucleotide sequence