Strain Fitness in Marinobacter adhaerens HP15 around HP15_4168

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,404,175	-		HP15_4167	0.20	+0.2
4,404,311	+		HP15_4167	0.49	+0.1
4,404,325	+		HP15_4167	0.52	+0.2
4,404,333	-		HP15_4167	0.53	+1.0
4,404,333	-		HP15_4167	0.53	-2.1
4,404,334	+		HP15_4167	0.54	+0.1
4,404,349	-		HP15_4167	0.57	-0.1
4,404,375	-		HP15_4167	0.62	-0.1
4,404,474	-		HP15_4167	0.84	+0.3
4,404,481	+		HP15_4167	0.85	+0.7
4,404,669	+				+0.6
4,404,669	+				-0.4
4,404,686	+				-0.9
4,404,686	+				-2.8
4,404,691	+				-1.7
4,404,767	+				-0.3
4,404,767	+				-2.7
4,404,770	-				+1.1
4,404,816	-				+0.2
4,404,905	+				+2.7
4,404,976	+				-2.9
4,405,136	-				-0.6
4,405,138	+				+0.6
4,405,191	-		HP15_4168	0.39	-1.6
4,405,195	+		HP15_4168	0.43	+0.1
4,405,203	-		HP15_4168	0.50	-0.7
4,405,207	+		HP15_4168	0.54	-0.8
4,405,287	+				+0.8
4,405,287	+				+0.4
4,405,287	+				-0.1
4,405,295	-				-1.2
4,405,295	-				-0.5
4,405,295	-				-1.4
4,405,314	+				-0.6
4,405,427	+				-2.1
4,405,435	-				-0.6
4,405,445	-				-1.3
4,405,456	-				-0.3
4,405,462	+				+0.4
4,405,492	+				-0.1
4,405,559	+				+0.4
4,405,612	-				-0.2
4,405,647	-				-0.0
4,405,706	+				-0.7
4,405,791	-				+0.5
4,405,829	+				+0.3
4,405,854	+				-0.4
4,405,862	-				-1.1
4,405,862	-				-0.3
4,406,027	+		HP15_4169	0.20	-0.4
4,406,035	-		HP15_4169	0.21	+0.3
4,406,074	-		HP15_4169	0.25	-2.3
4,406,144	+		HP15_4169	0.33	+0.6
4,406,144	+		HP15_4169	0.33	+0.2
4,406,191	+		HP15_4169	0.38	-1.0
4,406,210	+		HP15_4169	0.39	+0.1
4,406,218	-		HP15_4169	0.40	-0.2
4,406,248	+		HP15_4169	0.43	+0.2
4,406,256	-		HP15_4169	0.44	+0.1
4,406,256	-		HP15_4169	0.44	-0.3