Strain Fitness in Marinobacter adhaerens HP15 around HP15_3987

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,219,131	+		HP15_3986	0.22	-1.0
4,219,139	+		HP15_3986	0.23	-0.1
4,219,141	+		HP15_3986	0.23	+0.3
4,219,167	-		HP15_3986	0.25	-0.7
4,219,185	-		HP15_3986	0.27	-0.9
4,219,225	+		HP15_3986	0.30	+0.4
4,219,240	-		HP15_3986	0.31	-0.6
4,219,259	-		HP15_3986	0.33	+0.6
4,219,339	-		HP15_3986	0.39	+0.6
4,219,376	+		HP15_3986	0.42	-0.5
4,219,384	-		HP15_3986	0.43	-0.7
4,219,451	+		HP15_3986	0.48	+1.3
4,219,451	+		HP15_3986	0.48	+0.5
4,219,455	+		HP15_3986	0.49	+0.1
4,219,459	-		HP15_3986	0.49	+0.6
4,219,497	+		HP15_3986	0.52	+0.8
4,219,498	+		HP15_3986	0.52	-0.2
4,219,498	+		HP15_3986	0.52	-0.7
4,219,539	+		HP15_3986	0.56	-0.7
4,219,552	-		HP15_3986	0.57	-1.5
4,219,564	+		HP15_3986	0.58	-0.1
4,219,569	+		HP15_3986	0.58	+0.7
4,219,599	+		HP15_3986	0.60	+0.4
4,219,643	+		HP15_3986	0.64	+0.4
4,219,665	+		HP15_3986	0.66	+0.6
4,219,667	+		HP15_3986	0.66	+0.4
4,219,679	-		HP15_3986	0.67	+1.3
4,219,804	+		HP15_3986	0.77	-0.9
4,219,804	+		HP15_3986	0.77	+0.7
4,219,805	+		HP15_3986	0.77	-0.2
4,219,839	+		HP15_3986	0.80	-0.3
4,219,847	-		HP15_3986	0.81	-0.3
4,219,872	+		HP15_3986	0.83	-0.1
4,219,878	-		HP15_3986	0.83	+0.5
4,219,878	-		HP15_3986	0.83	+1.8
4,219,880	-		HP15_3986	0.83	+0.4
4,220,014	+				-0.1
4,220,022	-				+1.7
4,220,131	+				-0.9
4,220,131	+				-0.4
4,220,137	-				-0.6
4,220,139	-				-0.0
4,220,139	-				+0.1
4,220,139	-				+0.0
4,220,233	-		HP15_3987	0.13	-1.5
4,220,238	+		HP15_3987	0.13	-0.2
4,220,250	+		HP15_3987	0.15	+0.0
4,220,332	+		HP15_3987	0.23	+0.0
4,220,340	-		HP15_3987	0.24	-1.1
4,220,340	-		HP15_3987	0.24	+0.8
4,220,452	+		HP15_3987	0.35	-1.0
4,220,650	-		HP15_3987	0.55	+0.3
4,220,893	-		HP15_3987	0.79	-1.2
4,220,960	-		HP15_3987	0.86	+0.3
4,220,992	+		HP15_3987	0.89	-0.1
4,221,076	-				+0.1
4,221,076	-				+0.2
4,221,119	-				-0.8
4,221,134	-				-0.4
4,221,164	+				+0.1
4,221,218	-		HP15_3988	0.12	-0.3
4,221,236	+		HP15_3988	0.14	-0.6
4,221,282	-		HP15_3988	0.19	+0.3
4,221,379	-		HP15_3988	0.30	+0.9
4,221,443	+		HP15_3988	0.37	+0.3
4,221,487	+		HP15_3988	0.42	-0.0
4,221,487	+		HP15_3988	0.42	-1.0
4,221,495	-		HP15_3988	0.43	-0.5
4,221,537	-		HP15_3988	0.47	+0.7
4,221,537	-		HP15_3988	0.47	+0.4
4,221,578	+		HP15_3988	0.52	-1.7
4,221,586	-		HP15_3988	0.53	+0.1
4,221,640	+		HP15_3988	0.59	+0.1
4,221,640	+		HP15_3988	0.59	+0.1
4,221,686	-		HP15_3988	0.64	+0.0
4,221,704	+		HP15_3988	0.66	-0.0
4,221,712	-		HP15_3988	0.67	+0.0
4,221,735	-		HP15_3988	0.69	-0.0
4,221,767	-		HP15_3988	0.73	+0.3
4,222,083	+				-0.1