Strain Fitness in Marinobacter adhaerens HP15 around HP15_3796

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,018,229	-		HP15_3795	0.16	+0.7
4,018,229	-		HP15_3795	0.16	-0.0
4,018,285	+		HP15_3795	0.22	+0.3
4,018,308	-		HP15_3795	0.24	-1.1
4,018,311	+		HP15_3795	0.24	+0.0
4,018,311	+		HP15_3795	0.24	-1.4
4,018,311	+		HP15_3795	0.24	-2.5
4,018,373	-		HP15_3795	0.30	-0.4
4,018,423	+		HP15_3795	0.35	+0.4
4,018,446	+		HP15_3795	0.38	-0.0
4,018,465	+		HP15_3795	0.39	-0.5
4,018,473	+		HP15_3795	0.40	-0.6
4,018,554	-		HP15_3795	0.48	+0.7
4,018,626	+		HP15_3795	0.55	+0.2
4,018,632	-		HP15_3795	0.56	-0.8
4,018,642	-		HP15_3795	0.57	-0.3
4,018,747	-		HP15_3795	0.67	-1.2
4,018,751	+		HP15_3795	0.67	-0.2
4,018,751	+		HP15_3795	0.67	-0.3
4,018,751	+		HP15_3795	0.67	-1.8
4,018,751	+		HP15_3795	0.67	+0.1
4,018,752	-		HP15_3795	0.67	-0.5
4,018,759	-		HP15_3795	0.68	+0.3
4,018,759	-		HP15_3795	0.68	-0.3
4,018,759	-		HP15_3795	0.68	-0.5
4,018,759	-		HP15_3795	0.68	-2.0
4,018,813	+		HP15_3795	0.73	+0.6
4,018,813	+		HP15_3795	0.73	+0.1
4,018,821	-		HP15_3795	0.74	-0.5
4,018,821	-		HP15_3795	0.74	-0.6
4,018,830	-		HP15_3795	0.75	+0.1
4,018,830	-		HP15_3795	0.75	-1.0
4,018,850	-		HP15_3795	0.77	-0.3
4,018,852	+		HP15_3795	0.77	-0.8
4,018,860	-		HP15_3795	0.78	-0.4
4,018,873	+		HP15_3795	0.79	-0.1
4,018,888	-		HP15_3795	0.81	-0.2
4,018,897	+		HP15_3795	0.81	-0.5
4,018,906	+		HP15_3795	0.82	-1.3
4,018,982	+		HP15_3795	0.90	+0.6
4,019,080	+				-1.0
4,019,080	+				+0.1
4,019,088	-				+0.1
4,019,088	-				-3.3
4,019,088	-				+0.2
4,019,096	-				-0.6
4,019,311	+		HP15_3796	0.17	-1.3
4,019,319	-		HP15_3796	0.18	-0.1
4,019,319	-		HP15_3796	0.18	-1.2
4,019,319	-		HP15_3796	0.18	+0.9
4,019,360	+		HP15_3796	0.25	-0.4
4,019,392	+		HP15_3796	0.30	-0.6
4,019,416	-		HP15_3796	0.33	+0.2
4,019,429	+		HP15_3796	0.35	-0.9
4,019,476	+		HP15_3796	0.43	-0.7
4,019,476	+		HP15_3796	0.43	+0.4
4,019,481	+		HP15_3796	0.44	+0.1
4,019,489	-		HP15_3796	0.45	-0.4
4,019,489	-		HP15_3796	0.45	-0.4
4,019,493	+		HP15_3796	0.45	+0.3
4,019,513	+		HP15_3796	0.49	-1.2
4,019,513	+		HP15_3796	0.49	-1.6
4,019,553	+		HP15_3796	0.55	-0.5
4,019,594	+		HP15_3796	0.61	-0.5
4,019,642	+		HP15_3796	0.69	-1.3
4,019,642	+		HP15_3796	0.69	-1.6
4,019,642	+		HP15_3796	0.69	-0.3
4,019,697	+		HP15_3796	0.77	-0.2
4,019,705	-		HP15_3796	0.79	-0.5
4,019,743	+		HP15_3796	0.85	-0.8
4,019,743	+		HP15_3796	0.85	-0.0
4,019,743	+		HP15_3796	0.85	+1.0
4,019,751	-		HP15_3796	0.86	-0.4
4,019,751	-		HP15_3796	0.86	-1.0
4,019,751	-		HP15_3796	0.86	-0.2
4,019,776	+		HP15_3796	0.90	-0.2
4,019,800	-				-0.4
4,019,812	+				-1.8
4,019,846	+				-0.5
4,019,882	-				-0.5
4,019,917	+				-0.3
4,019,917	+				-0.2
4,019,925	-				+0.3
4,019,925	-				+0.8
4,019,950	-				-0.2
4,019,961	-				-0.5
4,020,026	-		HP15_3797	0.14	-0.3
4,020,061	+		HP15_3797	0.16	-0.7
4,020,108	-		HP15_3797	0.20	-0.3
4,020,108	-		HP15_3797	0.20	+0.4
4,020,110	+		HP15_3797	0.20	-1.1
4,020,143	+		HP15_3797	0.22	-0.1
4,020,299	-		HP15_3797	0.34	-0.9
4,020,308	+		HP15_3797	0.34	-2.3
4,020,424	-		HP15_3797	0.43	-0.2
4,020,439	+		HP15_3797	0.44	+0.0
4,020,439	+		HP15_3797	0.44	-1.1
4,020,441	-		HP15_3797	0.44	-1.2
4,020,447	-		HP15_3797	0.44	-0.9
4,020,466	-		HP15_3797	0.46	+0.3
4,020,512	+		HP15_3797	0.49	+0.1
4,020,520	-		HP15_3797	0.50	-1.2
4,020,546	-		HP15_3797	0.52	-0.6
4,020,573	-		HP15_3797	0.54	-1.9
4,020,638	+		HP15_3797	0.58	+0.2
4,020,646	-		HP15_3797	0.59	+0.6
4,020,648	-		HP15_3797	0.59	-0.6
4,020,675	+		HP15_3797	0.61	+1.4
4,020,675	+		HP15_3797	0.61	-0.3
4,020,699	-		HP15_3797	0.63	-0.2
4,020,703	-		HP15_3797	0.63	-0.4
4,020,739	+		HP15_3797	0.66	-2.2
4,020,784	+		HP15_3797	0.69	-0.8
4,020,805	-		HP15_3797	0.71	+0.4
4,020,819	+		HP15_3797	0.72	-0.2
4,020,835	-		HP15_3797	0.73	-0.3