Strain Fitness in Marinobacter adhaerens HP15 around HP15_3754

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,973,174	+		HP15_3752	0.45	+1.4
3,973,194	+		HP15_3752	0.47	-0.3
3,973,388	+		HP15_3752	0.71	-1.2
3,973,438	-		HP15_3752	0.77	+0.9
3,973,535	-		HP15_3752	0.88	-0.1
3,973,642	-				+0.1
3,973,677	+				-0.6
3,973,691	+				+0.0
3,973,691	+				-0.2
3,973,699	-				-0.3
3,973,744	-				-0.3
3,973,768	-				+0.6
3,973,780	+		HP15_3753	0.11	-1.2
3,973,824	-		HP15_3753	0.25	+0.3
3,973,834	+		HP15_3753	0.28	-1.7
3,973,842	-		HP15_3753	0.31	-0.1
3,973,860	+		HP15_3753	0.36	-0.6
3,973,863	-		HP15_3753	0.37	+1.3
3,973,868	-		HP15_3753	0.39	+0.2
3,973,868	-		HP15_3753	0.39	-0.6
3,973,933	+		HP15_3753	0.59	-0.8
3,974,125	+				+1.0
3,974,164	-		HP15_3754	0.13	-1.5
3,974,222	+		HP15_3754	0.26	-1.1
3,974,230	-		HP15_3754	0.28	+1.0
3,974,359	+		HP15_3754	0.56	+0.6
3,974,391	+		HP15_3754	0.63	-0.0
3,974,399	-		HP15_3754	0.65	+0.5
3,974,401	-		HP15_3754	0.65	+0.1
3,974,412	-		HP15_3754	0.68	+2.5
3,974,456	-		HP15_3754	0.77	-0.2
3,974,516	-				+0.6
3,974,587	+				-0.5
3,974,611	-				-0.0
3,974,658	+				+0.2
3,974,658	+				-0.2
3,974,734	+				+0.2
3,974,883	-				-0.9
3,974,890	-				-0.2
3,974,970	+		HP15_3755	0.14	+0.4
3,975,009	+		HP15_3755	0.17	+0.1
3,975,101	+		HP15_3755	0.23	-2.2
3,975,103	-		HP15_3755	0.23	-1.4
3,975,181	-		HP15_3755	0.28	-0.5
3,975,230	-		HP15_3755	0.31	+2.1
3,975,285	+		HP15_3755	0.35	-0.9
3,975,285	+		HP15_3755	0.35	+0.3
3,975,314	-		HP15_3755	0.36	+0.4
3,975,358	+		HP15_3755	0.39	-0.6
3,975,366	-		HP15_3755	0.40	+0.0
3,975,366	-		HP15_3755	0.40	-1.3
3,975,371	-		HP15_3755	0.40	-0.8
3,975,371	-		HP15_3755	0.40	+1.0
3,975,394	+		HP15_3755	0.42	+0.7
3,975,396	+		HP15_3755	0.42	+0.1
3,975,396	+		HP15_3755	0.42	-0.7
3,975,396	+		HP15_3755	0.42	-0.9
3,975,401	+		HP15_3755	0.42	-0.7
3,975,404	-		HP15_3755	0.42	+0.8
3,975,409	-		HP15_3755	0.43	+0.2
3,975,441	-		HP15_3755	0.45	-0.2
3,975,444	+		HP15_3755	0.45	+0.3
3,975,511	+		HP15_3755	0.49	-0.1
3,975,511	+		HP15_3755	0.49	-0.2
3,975,511	+		HP15_3755	0.49	-1.9
3,975,511	+		HP15_3755	0.49	-0.1
3,975,511	+		HP15_3755	0.49	-0.8
3,975,519	-		HP15_3755	0.50	-2.2
3,975,519	-		HP15_3755	0.50	-1.0