Strain Fitness in Marinobacter adhaerens HP15 around HP15_3568

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,757,608	+		HP15_3566	0.79	+0.4
3,757,649	-		HP15_3566	0.82	-2.5
3,757,701	+		HP15_3566	0.86	+0.2
3,757,711	-		HP15_3566	0.86	+0.5
3,757,765	+				+0.5
3,757,792	-				+0.4
3,757,792	-				-0.0
3,758,047	+		HP15_3567	0.39	+2.3
3,758,231	-		HP15_3567	0.82	-0.2
3,758,231	-		HP15_3567	0.82	-0.3
3,758,300	+				-1.7
3,758,404	+				-0.0
3,758,412	-				+0.4
3,758,427	-				+0.9
3,758,476	-				+0.7
3,758,476	-				-0.2
3,758,594	+				+0.1
3,758,649	+				-0.1
3,758,697	-				+0.7
3,758,799	-		HP15_3568	0.12	+0.4
3,758,819	+		HP15_3568	0.14	-1.8
3,758,827	-		HP15_3568	0.14	-0.7
3,758,827	-		HP15_3568	0.14	-0.1
3,758,827	-		HP15_3568	0.14	-0.1
3,758,847	+		HP15_3568	0.15	+2.0
3,758,855	-		HP15_3568	0.16	-0.3
3,758,887	+		HP15_3568	0.18	-1.2
3,758,924	+		HP15_3568	0.20	-0.3
3,759,007	+		HP15_3568	0.25	+0.4
3,759,024	+		HP15_3568	0.26	-1.1
3,759,091	-		HP15_3568	0.30	+0.0
3,759,138	-		HP15_3568	0.33	-0.6
3,759,146	+		HP15_3568	0.34	+0.1
3,759,173	+		HP15_3568	0.35	-1.4
3,759,181	-		HP15_3568	0.36	+0.1
3,759,215	-		HP15_3568	0.38	-1.1
3,759,242	-		HP15_3568	0.39	-0.2
3,759,395	-		HP15_3568	0.49	+0.3
3,759,397	+		HP15_3568	0.49	+1.3
3,759,405	-		HP15_3568	0.49	+0.6
3,759,501	-		HP15_3568	0.55	+0.9
3,759,558	-		HP15_3568	0.59	-0.5
3,759,575	-		HP15_3568	0.60	+0.9
3,759,625	-		HP15_3568	0.63	+0.7
3,759,625	-		HP15_3568	0.63	+0.6
3,759,759	-		HP15_3568	0.71	-0.3
3,759,765	-		HP15_3568	0.71	-0.7
3,759,778	-		HP15_3568	0.72	+0.4
3,759,779	+		HP15_3568	0.72	+1.4
3,759,801	+		HP15_3568	0.74	+0.9
3,759,867	-		HP15_3568	0.78	+0.4
3,759,868	+		HP15_3568	0.78	+0.3
3,759,870	+		HP15_3568	0.78	+0.6
3,759,870	+		HP15_3568	0.78	+0.9
3,759,870	+		HP15_3568	0.78	+0.6
3,759,870	+		HP15_3568	0.78	-1.0
3,759,876	-		HP15_3568	0.78	+0.4
3,759,876	-		HP15_3568	0.78	-0.3
3,759,878	-		HP15_3568	0.78	+0.3
3,759,910	+		HP15_3568	0.80	-0.8
3,759,910	+		HP15_3568	0.80	-0.2
3,759,954	-		HP15_3568	0.83	-0.1
3,760,012	+		HP15_3568	0.86	+0.5
3,760,038	+		HP15_3568	0.88	+1.2
3,760,206	+				-0.4
3,760,305	-				+0.4
3,760,352	-				-1.0
3,760,386	+				-1.0
3,760,394	-				-2.7
3,760,440	+				+0.0
3,760,566	+		HP15_3569	0.10	+0.7
3,760,685	+		HP15_3569	0.19	+1.4
3,760,747	+		HP15_3569	0.23	+0.2
3,760,790	+		HP15_3569	0.26	-2.4
3,760,872	-		HP15_3569	0.32	+0.4
3,760,873	-		HP15_3569	0.32	-1.8
3,760,909	+		HP15_3569	0.35	+0.3
3,760,922	-		HP15_3569	0.36	+0.3
3,760,947	+		HP15_3569	0.37	+0.9
3,760,947	+		HP15_3569	0.37	-0.1
3,760,955	-		HP15_3569	0.38	-0.0
3,760,991	+		HP15_3569	0.41	+1.0
3,760,999	-		HP15_3569	0.41	-0.1
3,761,005	-		HP15_3569	0.42	+0.8
3,761,041	+		HP15_3569	0.44	+1.0
3,761,093	-		HP15_3569	0.48	+0.5